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Zinc in PDB 3v1g: Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health

Protein crystallography data

The structure of Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health, PDB code: 3v1g was solved by Z.L.Wan, Q.X.Hua, N.P.Wickramasinghe, K.Huang, A.T.Petkova, S.Q.Hu, N.B.Phillips, I.J.Yeh, J.Whittake, F.Ismail-Beigi, P.G.Katsoyyannis, R.Tycko, M.A.Weiss, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.54 / 2.20
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 79.081, 79.081, 37.402, 90.00, 90.00, 120.00
R / Rfree (%) 22.9 / 32.3

Other elements in 3v1g:

The structure of Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health (pdb code 3v1g). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health, PDB code: 3v1g:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 3v1g

Go back to Zinc Binding Sites List in 3v1g
Zinc binding site 1 out of 2 in the Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn31

b:1.7
occ:0.33
NE2 B:HIS10 2.1 29.9 1.0
CE1 B:HIS10 3.0 32.3 1.0
CD2 B:HIS10 3.1 29.6 1.0
ND1 B:HIS10 4.2 30.0 1.0
CG B:HIS10 4.2 30.2 1.0
O B:HOH32 4.2 64.3 1.0
O B:HOH77 4.6 38.4 1.0

Zinc binding site 2 out of 2 in 3v1g

Go back to Zinc Binding Sites List in 3v1g
Zinc binding site 2 out of 2 in the Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn31

b:1.7
occ:0.33
NE2 D:HIS10 2.1 22.5 1.0
CL D:CL32 2.2 1.7 0.3
CD2 D:HIS10 3.0 19.7 1.0
CE1 D:HIS10 3.1 21.3 1.0
CG D:HIS10 4.2 21.4 1.0
ND1 D:HIS10 4.2 26.2 1.0
O D:LEU6 4.5 23.2 1.0
CB D:LEU6 4.8 22.7 1.0
O D:HOH36 5.0 32.4 1.0

Reference:

Z.L.Wan, Q.X.Hua, N.P.Wickramasinghe, K.Huang, A.T.Petkova, S.Q.Hu, N.B.Phillips, I.J.Yeh, J.Whittake, F.Ismail-Beigi, P.G.Katsoyyannis, R.Tycko, M.A.Weiss. Forestalling Insulin Fibrillation By Insertion of A Chiral Clamp Mechanism-Based Application of Protein Engineering to Global Health To Be Published.
Page generated: Sat Oct 26 17:33:44 2024

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