Zinc in PDB 3ugw: Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution, PDB code: 3ugw was solved by P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	62.57 / 1.87
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	62.100, 49.866, 65.514, 90.00, 107.23, 90.00
R / Rfree (%)	18.1 / 22.3

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution also contains other interesting chemical elements:

Iron

(Fe)

1 atom

The binding sites of Zinc atom in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution (pdb code 3ugw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution, PDB code: 3ugw:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn81 b:23.6 occ:1.00 OE2 A:GLU659 2.1 24.0 1.0 OE1 A:GLU659 2.3 17.7 1.0 CD A:GLU659 2.5 20.8 1.0 O A:GLY653 4.0 22.6 1.0 CG A:GLU659 4.0 20.7 1.0 O A:ARG654 4.3 20.1 1.0 O A:HOH26 4.6 44.5 1.0 CA A:PRO655 4.6 17.9 1.0 CB A:GLU659 4.8 20.4 1.0 N A:THR656 4.8 18.0 1.0 C A:ARG654 5.0 23.5 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn82 b:25.5 occ:1.00 NE2 A:HIS588 2.0 20.5 1.0 O A:HOH311 2.6 32.7 1.0 CE1 A:HIS588 3.0 20.3 1.0 CD2 A:HIS588 3.1 21.9 1.0 O A:HOH702 4.0 46.4 1.0 CG2 A:VAL591 4.0 18.6 1.0 ND1 A:HIS588 4.1 24.5 1.0 CG A:HIS588 4.2 20.4 1.0 O A:HOH682 4.7 20.9 1.0 O3' A:DCZ677 4.7 40.8 1.0

P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution To Be Published.