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Zinc in PDB 3ua9: Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor

Enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor

All present enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor:
2.4.2.30;

Protein crystallography data

The structure of Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor, PDB code: 3ua9 was solved by M.Narwal, L.Lehtio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.41 / 2.15
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 92.820, 93.770, 121.830, 90.00, 90.00, 90.00
R / Rfree (%) 20.5 / 23.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor (pdb code 3ua9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor, PDB code: 3ua9:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 3ua9

Go back to Zinc Binding Sites List in 3ua9
Zinc binding site 1 out of 2 in the Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1

b:36.6
occ:1.00
SG A:CYS1089 2.1 31.8 1.0
ND1 A:HIS1084 2.3 40.9 1.0
SG A:CYS1092 2.3 37.8 1.0
SG A:CYS1081 2.4 32.1 1.0
CB A:CYS1081 3.2 36.7 1.0
CB A:CYS1089 3.2 31.4 1.0
CB A:CYS1092 3.2 35.2 1.0
CG A:HIS1084 3.3 40.5 1.0
CE1 A:HIS1084 3.3 40.0 1.0
CB A:HIS1084 3.5 38.7 1.0
N A:HIS1084 3.8 38.1 1.0
N A:CYS1092 3.9 34.3 1.0
O A:HOH70 4.1 30.9 1.0
CA A:CYS1092 4.2 34.9 1.0
CA A:HIS1084 4.3 38.7 1.0
CB A:VAL1083 4.3 39.1 1.0
NE2 A:HIS1084 4.4 40.6 1.0
CD2 A:HIS1084 4.4 40.9 1.0
CA A:CYS1089 4.6 31.6 1.0
CA A:CYS1081 4.7 36.6 1.0
CB A:ILE1091 4.7 34.4 1.0
CG1 A:VAL1083 4.7 39.8 1.0
C A:VAL1083 4.7 38.4 1.0
N A:VAL1083 4.8 38.3 1.0
O A:HOH61 4.9 32.0 1.0
CA A:VAL1083 4.9 38.9 1.0

Zinc binding site 2 out of 2 in 3ua9

Go back to Zinc Binding Sites List in 3ua9
Zinc binding site 2 out of 2 in the Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Human Tankyrase 2 in Complex with A Selective Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn2

b:33.2
occ:1.00
SG B:CYS1089 2.0 28.4 1.0
ND1 B:HIS1084 2.2 40.0 1.0
SG B:CYS1092 2.4 34.6 1.0
SG B:CYS1081 2.5 34.5 1.0
CE1 B:HIS1084 3.1 42.4 1.0
CB B:CYS1089 3.2 29.3 1.0
CB B:CYS1092 3.2 32.0 1.0
CB B:CYS1081 3.2 35.1 1.0
CG B:HIS1084 3.2 39.2 1.0
CB B:HIS1084 3.6 37.2 1.0
N B:CYS1092 3.9 30.5 1.0
N B:HIS1084 3.9 36.3 1.0
CA B:CYS1092 4.1 31.5 1.0
NE2 B:HIS1084 4.2 40.8 1.0
CD2 B:HIS1084 4.3 39.9 1.0
CB B:VAL1083 4.4 37.0 1.0
CA B:HIS1084 4.4 36.8 1.0
CA B:CYS1089 4.6 29.6 1.0
CA B:CYS1081 4.7 35.5 1.0
CB B:ILE1091 4.7 30.6 1.0
C B:VAL1083 4.8 36.6 1.0
N B:VAL1083 4.8 36.7 1.0
O B:HOH83 4.9 36.5 1.0
CA B:VAL1083 4.9 37.2 1.0
C B:ILE1091 5.0 30.4 1.0

Reference:

M.Narwal, H.Venkannagari, L.Lehtio. Structural Basis of Selective Inhibition of Human Tankyrases. J.Med.Chem. V. 55 1360 2012.
ISSN: ISSN 0022-2623
PubMed: 22233320
DOI: 10.1021/JM201510P
Page generated: Sat Oct 26 17:05:37 2024

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