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Zinc in PDB 3scn: Crystal Structure of Rice BGLU1 E386G Mutant

Enzymatic activity of Crystal Structure of Rice BGLU1 E386G Mutant

All present enzymatic activity of Crystal Structure of Rice BGLU1 E386G Mutant:
3.2.1.21;

Protein crystallography data

The structure of Crystal Structure of Rice BGLU1 E386G Mutant, PDB code: 3scn was solved by S.Pengthaisong, S.G.Withers, B.Kuaprasert, J.R.Ketudat Cairns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.84 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 79.382, 100.828, 127.415, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 24

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Rice BGLU1 E386G Mutant (pdb code 3scn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Rice BGLU1 E386G Mutant, PDB code: 3scn:

Zinc binding site 1 out of 1 in 3scn

Go back to Zinc Binding Sites List in 3scn
Zinc binding site 1 out of 1 in the Crystal Structure of Rice BGLU1 E386G Mutant


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Rice BGLU1 E386G Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1001

b:12.2
occ:1.00
ND1 B:HIS68 2.0 13.4 1.0
ND1 A:HIS68 2.0 13.7 1.0
OD2 A:ASP65 2.1 9.7 1.0
OD2 B:ASP65 2.1 10.2 1.0
CG A:ASP65 2.8 10.3 1.0
CG B:ASP65 2.8 10.2 1.0
OD1 B:ASP65 2.8 10.2 1.0
OD1 A:ASP65 2.8 10.3 1.0
CE1 A:HIS68 3.0 13.4 1.0
CE1 B:HIS68 3.0 13.3 1.0
CG B:HIS68 3.0 13.1 1.0
CG A:HIS68 3.1 12.8 1.0
CB B:HIS68 3.4 12.9 1.0
CB A:HIS68 3.5 12.8 1.0
NE2 B:HIS68 4.1 13.9 1.0
NE2 A:HIS68 4.1 13.7 1.0
O B:HOH697 4.1 15.3 1.0
CD2 B:HIS68 4.1 12.6 1.0
O A:HOH478 4.2 15.7 1.0
CD2 A:HIS68 4.2 12.7 1.0
CB A:ASP65 4.2 9.7 1.0
CB B:ASP65 4.3 9.8 1.0
O A:HOH677 4.7 19.0 1.0
CA B:HIS68 4.8 13.2 1.0
O B:HOH714 4.8 27.8 1.0
CA A:HIS68 4.9 13.3 1.0

Reference:

S.Pengthaisong, S.G.Withers, B.Kuaprasert, J.R.Ketudat Cairns. Structural Investigation of the Basis For Cellooligosaccharide Synthesis By Rice BGLU1 Glycosynthases To Be Published.
Page generated: Wed Dec 16 04:49:50 2020

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