Zinc in PDB 3q4r: Crystal Structure of A Deletion Mutant(11-185) of Hypothetical Protein MJ0754 with ZN2+

The structure of Crystal Structure of A Deletion Mutant(11-185) of Hypothetical Protein MJ0754 with ZN2+, PDB code: 3q4r was solved by K.Y.Hwang, E.H.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.13 / 1.60
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	52.943, 80.129, 93.659, 90.00, 90.00, 90.00
R / Rfree (%)	18.4 / 22.4

The binding sites of Zinc atom in the Crystal Structure of A Deletion Mutant(11-185) of Hypothetical Protein MJ0754 with ZN2+ (pdb code 3q4r). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of A Deletion Mutant(11-185) of Hypothetical Protein MJ0754 with ZN2+, PDB code: 3q4r:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of A Deletion Mutant(11-185) of Hypothetical Protein MJ0754 with ZN2+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Deletion Mutant(11-185) of Hypothetical Protein MJ0754 with ZN2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:16.3 occ:1.00 O A:HOH355 1.9 16.6 1.0 OE1 A:GLU28 2.0 15.0 1.0 ND1 A:HIS57 2.1 10.2 1.0 OE1 A:GLU54 2.1 12.8 1.0 O A:HOH353 2.3 16.8 1.0 CE1 A:HIS57 3.0 18.3 1.0 CD A:GLU28 3.0 16.5 1.0 CD A:GLU54 3.1 14.1 1.0 CG A:HIS57 3.2 16.3 1.0 OE2 A:GLU28 3.4 16.0 1.0 ZN A:ZN202 3.4 17.1 1.0 OE2 A:GLU54 3.5 16.5 1.0 CB A:HIS57 3.6 15.1 1.0 OG A:SER143 4.0 16.2 1.0 NE2 A:HIS57 4.1 19.6 1.0 OD2 A:ASP116 4.2 18.4 1.0 CD2 A:HIS57 4.2 17.1 1.0 CG A:GLU28 4.3 13.4 1.0 CE1 A:HIS146 4.4 20.7 1.0 ND1 A:HIS146 4.5 15.3 1.0 OD1 A:ASP116 4.5 18.2 1.0 CG A:GLU54 4.6 15.7 1.0 CG A:ASP116 4.6 17.3 1.0 CA A:GLU54 4.6 15.0 1.0 CB A:GLU28 4.8 14.7 1.0 CB A:GLU54 4.9 15.9 1.0 CG A:LEU139 5.0 25.9 1.0 CA A:GLU28 5.0 13.2 1.0 O A:LEU139 5.0 20.0 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of A Deletion Mutant(11-185) of Hypothetical Protein MJ0754 with ZN2+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of A Deletion Mutant(11-185) of Hypothetical Protein MJ0754 with ZN2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn202 b:17.1 occ:1.00 O A:HOH355 1.8 16.6 1.0 OE2 A:GLU54 1.9 16.5 1.0 ND1 A:HIS146 2.1 15.3 1.0 OE2 A:GLU113 2.1 17.0 1.0 OE1 A:GLU113 2.5 16.4 1.0 CD A:GLU113 2.6 16.0 1.0 CD A:GLU54 2.9 14.1 1.0 CE1 A:HIS146 3.0 20.7 1.0 CG A:HIS146 3.2 15.8 1.0 OE1 A:GLU54 3.3 12.8 1.0 ZN A:ZN201 3.4 16.3 1.0 CB A:HIS146 3.6 14.0 1.0 CG A:GLU113 4.1 15.8 1.0 NE2 A:HIS146 4.1 14.1 1.0 OG A:SER143 4.1 16.2 1.0 CA A:SER143 4.2 16.3 1.0 CG2 A:ILE50 4.2 15.4 1.0 CD2 A:HIS146 4.2 16.6 1.0 CG A:GLU54 4.3 15.7 1.0 CE2 A:TYR35 4.4 14.6 1.0 OH A:TYR35 4.5 17.6 1.0 CB A:SER143 4.6 15.0 1.0 ND1 A:HIS57 4.6 10.2 1.0 CE1 A:HIS57 4.6 18.3 1.0 N A:SER143 4.8 16.4 1.0 CB A:ALA31 4.8 14.7 1.0 O A:HOH353 4.8 16.8 1.0 O A:GLY142 4.9 17.0 1.0 CZ A:TYR35 5.0 15.8 1.0

E.H.Lee, H.S.Kim, H.Y.Kim, Y.H.Jeon, K.Y.Hwang. Structural Insights Into the Metal Binding Properties of Hypothetical Protein MJ0754 From Methanococcus Jannaschii. Proteins V. 79 2358 2011.
ISSN: ESSN 1097-0134
PubMed: 21604308
DOI: 10.1002/PROT.23066