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Zinc in PDB 3mdz: Crystal Structure of Human Carbonic Anhydrase VII [Isoform 1], CA7

Enzymatic activity of Crystal Structure of Human Carbonic Anhydrase VII [Isoform 1], CA7

All present enzymatic activity of Crystal Structure of Human Carbonic Anhydrase VII [Isoform 1], CA7:
4.2.1.1;

Protein crystallography data

The structure of Crystal Structure of Human Carbonic Anhydrase VII [Isoform 1], CA7, PDB code: 3mdz was solved by E.Ugochukwu, N.Shafqat, E.Pilka, A.Chaikuad, T.Krojer, J.Muniz, J.Kim, J.Bray, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, F.Von Delft, E.P.Carpenter, W.W.Yue, U.Oppermann, Structural Genomics Consortium(Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.74 / 2.32
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 69.710, 97.746, 82.443, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 25.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Human Carbonic Anhydrase VII [Isoform 1], CA7 (pdb code 3mdz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Human Carbonic Anhydrase VII [Isoform 1], CA7, PDB code: 3mdz:

Zinc binding site 1 out of 1 in 3mdz

Go back to Zinc Binding Sites List in 3mdz
Zinc binding site 1 out of 1 in the Crystal Structure of Human Carbonic Anhydrase VII [Isoform 1], CA7


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human Carbonic Anhydrase VII [Isoform 1], CA7 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn263

b:35.1
occ:1.00
N1 A:EZL264 1.9 42.0 1.0
NE2 A:HIS96 2.0 26.3 1.0
ND1 A:HIS121 2.1 27.2 1.0
NE2 A:HIS98 2.2 29.3 1.0
CD2 A:HIS96 2.8 32.9 1.0
S1 A:EZL264 3.0 42.9 1.0
CE1 A:HIS121 3.0 29.9 1.0
CD2 A:HIS98 3.0 28.3 1.0
O2 A:EZL264 3.1 43.0 1.0
CE1 A:HIS96 3.1 33.4 1.0
CG A:HIS121 3.2 28.3 1.0
CE1 A:HIS98 3.3 32.6 1.0
CB A:HIS121 3.5 30.1 1.0
OE1 A:GLU108 3.8 43.9 1.0
OG1 A:THR201 3.8 26.4 1.0
O1 A:EZL264 4.0 38.1 1.0
CG A:HIS96 4.0 32.7 1.0
ND1 A:HIS96 4.1 31.8 1.0
NE2 A:HIS121 4.2 31.1 1.0
CG A:HIS98 4.2 29.5 1.0
CD2 A:HIS121 4.3 30.2 1.0
C1 A:EZL264 4.3 45.2 1.0
ND1 A:HIS98 4.3 31.1 1.0
O A:HOH283 4.7 53.3 1.0
CD A:GLU108 4.8 41.3 1.0
CA A:HIS121 5.0 32.2 1.0

Reference:

E.Ugochukwu, N.Shafqat, E.Pilka, A.Chaikuad, T.Krojer, J.Muniz, J.Kim, J.Bray, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, F.Von Delft, E.P.Carpenter, W.W.Yue, U.Oppermann. Crystal Structure of Human Carbonic Anhydrase VII [Isoform 1], CA7 To Be Published.
Page generated: Wed Dec 16 04:34:54 2020

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