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Zinc in PDB 3l7x: The Crystal Structure of Smu.412C From Streptococcus Mutans UA159

Protein crystallography data

The structure of The Crystal Structure of Smu.412C From Streptococcus Mutans UA159, PDB code: 3l7x was solved by X.-D.Su, Z.Y.Ye, X.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.27 / 1.70
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 53.348, 53.348, 141.059, 90.00, 90.00, 90.00
R / Rfree (%) 18.8 / 21.3

Other elements in 3l7x:

The structure of The Crystal Structure of Smu.412C From Streptococcus Mutans UA159 also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of Smu.412C From Streptococcus Mutans UA159 (pdb code 3l7x). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of Smu.412C From Streptococcus Mutans UA159, PDB code: 3l7x:

Zinc binding site 1 out of 1 in 3l7x

Go back to Zinc Binding Sites List in 3l7x
Zinc binding site 1 out of 1 in the The Crystal Structure of Smu.412C From Streptococcus Mutans UA159


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Smu.412C From Streptococcus Mutans UA159 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn140

b:18.2
occ:0.80
ND1 A:HIS97 2.1 19.1 1.0
ND1 A:HIS46 2.1 19.8 1.0
SG A:CYS4 2.3 21.4 1.0
SG A:CYS7 2.3 23.4 1.0
CE1 A:HIS97 3.0 19.9 1.0
CE1 A:HIS46 3.0 18.9 1.0
CG A:HIS97 3.1 18.4 1.0
CG A:HIS46 3.2 19.7 1.0
CB A:CYS4 3.3 19.5 1.0
CB A:CYS7 3.4 22.9 1.0
CB A:HIS97 3.5 16.7 1.0
N A:CYS7 3.5 20.5 1.0
CB A:HIS46 3.6 22.0 1.0
CA A:CYS7 3.8 22.6 1.0
NE2 A:HIS97 4.2 20.9 1.0
NE2 A:HIS46 4.2 21.0 1.0
CB A:MET1 4.2 24.6 1.0
CD2 A:HIS97 4.2 19.8 1.0
CD2 A:HIS46 4.3 19.6 1.0
CA A:HIS46 4.3 23.4 1.0
C A:PHE6 4.4 21.3 1.0
CA A:HIS97 4.5 17.0 1.0
CB A:PHE6 4.6 20.5 1.0
CA A:CYS4 4.7 19.9 1.0
O A:HOH198 4.8 41.2 1.0
O A:CYS4 4.8 24.5 1.0
CA A:PHE6 4.9 20.0 1.0
O A:HOH159 4.9 26.1 1.0
N A:MET1 4.9 31.4 1.0
C A:CYS4 4.9 23.3 1.0
N A:PHE6 5.0 21.6 1.0

Reference:

X.-D.Su, Z.Y.Ye, X.Liu. The Crystal Structure of Smu.412C From Streptococcus Mutans UA159 To Be Published.
Page generated: Wed Dec 16 04:31:53 2020

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