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Zinc in PDB 3jwp: Crystal Structure of Plasmodium Falciparum SIR2A (PF13_0152) in Complex with Amp

Protein crystallography data

The structure of Crystal Structure of Plasmodium Falciparum SIR2A (PF13_0152) in Complex with Amp, PDB code: 3jwp was solved by A.K.Wernimont, A.Hutchinson, Y.H.Lin, F.Mackenzie, G.Senisterra, A.Allali-Hassanali, M.Vedadi, M.Ravichandran, D.Cossar, I.Kozieradzki, Y.Zhao, M.Schapira, C.H.Arrowsmith, C.Bountra, J.Weigelt, A.M.Edwards, R.Hui, W.Qiu, V.Brand, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.88 / 2.65
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 106.564, 106.564, 44.968, 90.00, 90.00, 120.00
R / Rfree (%) 20.6 / 27.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Plasmodium Falciparum SIR2A (PF13_0152) in Complex with Amp (pdb code 3jwp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Plasmodium Falciparum SIR2A (PF13_0152) in Complex with Amp, PDB code: 3jwp:

Zinc binding site 1 out of 1 in 3jwp

Go back to Zinc Binding Sites List in 3jwp
Zinc binding site 1 out of 1 in the Crystal Structure of Plasmodium Falciparum SIR2A (PF13_0152) in Complex with Amp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Plasmodium Falciparum SIR2A (PF13_0152) in Complex with Amp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2001

b:59.3
occ:1.00
SG A:CYS135 2.3 30.7 1.0
SG A:CYS162 2.3 29.9 1.0
SG A:CYS160 2.3 30.1 1.0
SG A:CYS132 2.4 28.5 1.0
CB A:CYS160 3.1 30.1 1.0
CB A:CYS132 3.1 29.1 1.0
CB A:CYS135 3.1 31.0 1.0
CB A:CYS162 3.2 28.9 1.0
N A:CYS135 3.8 30.7 1.0
CA A:CYS135 4.0 31.0 1.0
N A:CYS162 4.1 29.1 1.0
CA A:CYS162 4.2 28.9 1.0
OG1 A:THR134 4.2 30.7 1.0
CA A:CYS160 4.5 30.0 1.0
N A:GLY164 4.5 29.2 1.0
CB A:LYS137 4.6 31.4 1.0
CA A:CYS132 4.6 28.9 1.0
C A:CYS135 4.6 31.2 1.0
CA A:GLY164 4.7 29.1 1.0
C A:CYS160 4.8 29.8 1.0
N A:ASN136 4.8 31.2 1.0
C A:CYS162 4.9 28.8 1.0
N A:LYS137 4.9 31.2 1.0
C A:THR134 4.9 30.2 1.0
N A:GLY163 5.0 28.8 1.0

Reference:

A.K.Wernimont, A.Hutchinson, Y.H.Lin, F.Mackenzie, G.Senisterra, A.Allali-Hassanali, M.Vedadi, M.Ravichandran, D.Cossar, I.Kozieradzki, Y.Zhao, M.Schapira, C.H.Arrowsmith, C.Bountra, J.Weigelt, A.M.Edwards, R.Hui, W.Qiu, V.Brand. Crystal Structure of Plasmodium Falciparum SIR2A (PF13_0152) in Complex with Amp To Be Published.
Page generated: Sat Oct 26 07:32:20 2024

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