Zinc in PDB 2yql: Solution Structure of the Phd Domain in Phd Finger Protein 21A

The binding sites of Zinc atom in the Solution Structure of the Phd Domain in Phd Finger Protein 21A (pdb code 2yql). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Phd Domain in Phd Finger Protein 21A, PDB code: 2yql:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Phd Domain in Phd Finger Protein 21A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Phd Domain in Phd Finger Protein 21A within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 ND1 A:HIS32 2.1 0.0 1.0 SG A:CYS15 2.2 0.0 1.0 SG A:CYS35 2.3 0.0 1.0 SG A:CYS12 2.4 0.0 1.0 HB2 A:HIS32 2.8 0.0 1.0 CE1 A:HIS32 3.0 0.0 1.0 CG A:HIS32 3.1 0.0 1.0 HB2 A:CYS35 3.1 0.0 1.0 HB2 A:CYS12 3.2 0.0 1.0 CB A:CYS35 3.2 0.0 1.0 CB A:CYS12 3.3 0.0 1.0 HE1 A:HIS32 3.3 0.0 1.0 HB3 A:CYS12 3.3 0.0 1.0 H A:CYS15 3.4 0.0 1.0 CB A:HIS32 3.4 0.0 1.0 HB3 A:CYS15 3.4 0.0 1.0 CB A:CYS15 3.5 0.0 1.0 HB3 A:CYS35 3.5 0.0 1.0 HB A:VAL14 3.7 0.0 1.0 HB3 A:HIS32 3.9 0.0 1.0 N A:CYS15 4.0 0.0 1.0 NE2 A:HIS32 4.1 0.0 1.0 CD2 A:HIS32 4.1 0.0 1.0 H A:HIS32 4.2 0.0 1.0 H A:ARG16 4.2 0.0 1.0 HB2 A:CYS15 4.3 0.0 1.0 CA A:CYS15 4.4 0.0 1.0 HB2 A:LYS17 4.5 0.0 1.0 H A:CYS35 4.6 0.0 1.0 CA A:CYS35 4.6 0.0 1.0 HD3 A:LYS17 4.7 0.0 1.0 CA A:CYS12 4.7 0.0 1.0 H A:VAL14 4.7 0.0 1.0 CA A:HIS32 4.7 0.0 1.0 CB A:VAL14 4.8 0.0 1.0 HD23 A:LEU21 4.8 0.0 1.0 N A:ARG16 4.8 0.0 1.0 N A:HIS32 4.8 0.0 1.0 N A:CYS35 4.9 0.0 1.0 HG12 A:VAL14 4.9 0.0 1.0 HE2 A:HIS32 5.0 0.0 1.0 C A:CYS15 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Phd Domain in Phd Finger Protein 21A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Phd Domain in Phd Finger Protein 21A within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 SG A:CYS24 2.2 0.0 1.0 SG A:CYS50 2.2 0.0 1.0 SG A:CYS53 2.3 0.0 1.0 SG A:CYS27 2.4 0.0 1.0 H A:CYS27 2.9 0.0 1.0 HB2 A:CYS53 3.1 0.0 1.0 CB A:CYS24 3.2 0.0 1.0 HB2 A:CYS24 3.3 0.0 1.0 HB3 A:CYS27 3.4 0.0 1.0 CB A:CYS53 3.4 0.0 1.0 H A:CYS50 3.4 0.0 1.0 HB3 A:CYS24 3.4 0.0 1.0 CB A:CYS27 3.5 0.0 1.0 HB3 A:CYS50 3.5 0.0 1.0 CB A:CYS50 3.5 0.0 1.0 HG21 A:ILE49 3.6 0.0 1.0 N A:CYS27 3.7 0.0 1.0 HB A:THR26 3.8 0.0 1.0 HG23 A:ILE49 3.9 0.0 1.0 H A:CYS53 3.9 0.0 1.0 N A:CYS50 4.0 0.0 1.0 OG1 A:THR26 4.0 0.0 1.0 HB3 A:CYS53 4.1 0.0 1.0 CA A:CYS27 4.2 0.0 1.0 CA A:CYS50 4.3 0.0 1.0 CG2 A:ILE49 4.3 0.0 1.0 N A:CYS53 4.3 0.0 1.0 HB2 A:CYS50 4.3 0.0 1.0 HB2 A:CYS27 4.4 0.0 1.0 CA A:CYS53 4.4 0.0 1.0 CB A:THR26 4.4 0.0 1.0 HE2 A:TYR31 4.5 0.0 1.0 O A:CYS50 4.5 0.0 1.0 H A:THR26 4.6 0.0 1.0 HA A:CYS53 4.7 0.0 1.0 CA A:CYS24 4.7 0.0 1.0 HA A:ILE49 4.7 0.0 1.0 C A:CYS50 4.7 0.0 1.0 HB2 A:ARG29 4.8 0.0 1.0 HB3 A:ARG52 4.8 0.0 1.0 C A:THR26 4.8 0.0 1.0 C A:CYS27 4.9 0.0 1.0 HG22 A:ILE49 4.9 0.0 1.0 HG1 A:THR26 4.9 0.0 1.0 HA A:CYS24 4.9 0.0 1.0 HB2 A:ARG52 4.9 0.0 1.0 HG3 A:ARG29 5.0 0.0 1.0 N A:THR26 5.0 0.0 1.0 CA A:THR26 5.0 0.0 1.0 C A:ILE49 5.0 0.0 1.0

F.He, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyama. Solution Structure of the Phd Domain in Phd Finger Protein 21A To Be Published.