Zinc in PDB 2peb: Crystal Structure of A Putative Dioxygenase (NPUN_F1925) From Nostoc Punctiforme Pcc 73102 at 1.46 A Resolution

The structure of Crystal Structure of A Putative Dioxygenase (NPUN_F1925) From Nostoc Punctiforme Pcc 73102 at 1.46 A Resolution, PDB code: 2peb was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.40 / 1.46
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	44.562, 57.042, 46.676, 90.00, 104.81, 90.00
R / Rfree (%)	18.5 / 21.3

The binding sites of Zinc atom in the Crystal Structure of A Putative Dioxygenase (NPUN_F1925) From Nostoc Punctiforme Pcc 73102 at 1.46 A Resolution (pdb code 2peb). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of A Putative Dioxygenase (NPUN_F1925) From Nostoc Punctiforme Pcc 73102 at 1.46 A Resolution, PDB code: 2peb:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of A Putative Dioxygenase (NPUN_F1925) From Nostoc Punctiforme Pcc 73102 at 1.46 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Putative Dioxygenase (NPUN_F1925) From Nostoc Punctiforme Pcc 73102 at 1.46 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn200 b:14.3 occ:0.50 O1 A:UNL201 1.7 41.1 1.0 NE2 A:HIS14 1.9 22.0 1.0 ND1 A:HIS12 2.1 28.5 1.0 NE2 A:HIS84 2.2 29.3 1.0 O7 A:UNL201 2.3 57.3 1.0 O2 A:UNL201 2.8 57.1 1.0 CE1 A:HIS14 2.8 30.4 1.0 CD2 A:HIS14 2.9 28.6 1.0 CG A:HIS12 3.0 29.9 1.0 CE1 A:HIS84 3.1 26.8 1.0 CE1 A:HIS12 3.1 28.9 1.0 CB A:HIS12 3.2 31.1 1.0 CD2 A:HIS84 3.2 26.5 1.0 O6 A:UNL201 3.7 45.0 1.0 ND1 A:HIS14 4.0 24.4 1.0 O3 A:UNL201 4.0 56.6 1.0 OE1 A:GLN57 4.0 41.0 1.0 CG A:HIS14 4.0 28.0 1.0 NE2 A:HIS94 4.1 29.4 1.0 CD2 A:HIS12 4.2 27.9 1.0 O5 A:UNL201 4.2 55.2 1.0 ND1 A:HIS84 4.2 26.1 1.0 NE2 A:HIS12 4.2 36.5 1.0 CG A:HIS84 4.3 27.5 1.0 O4 A:UNL201 4.5 47.1 1.0 CE1 A:HIS94 4.6 29.5 1.0 CD A:GLN57 4.6 41.2 1.0 CA A:HIS12 4.7 26.5 1.0 OE2 A:GLU86 4.8 33.6 0.5 CG A:GLN57 5.0 44.2 1.0 CD2 A:HIS94 5.0 26.5 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of A Putative Dioxygenase (NPUN_F1925) From Nostoc Punctiforme Pcc 73102 at 1.46 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of A Putative Dioxygenase (NPUN_F1925) From Nostoc Punctiforme Pcc 73102 at 1.46 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn200 b:20.4 occ:0.50 O6 B:UNL201 1.5 44.4 1.0 NE2 B:HIS14 2.0 32.8 1.0 NE2 B:HIS84 2.3 32.3 1.0 ND1 B:HIS12 2.4 38.8 1.0 O5 B:UNL201 2.5 54.3 1.0 CE1 B:HIS14 2.7 32.1 1.0 O3 B:UNL201 2.9 38.2 1.0 CE1 B:HIS84 3.0 29.7 1.0 CD2 B:HIS14 3.2 33.5 1.0 CG B:HIS12 3.2 32.5 1.0 CB B:HIS12 3.3 29.6 1.0 O4 B:UNL201 3.3 52.8 1.0 CE1 B:HIS12 3.5 32.3 1.0 CD2 B:HIS84 3.5 29.2 1.0 OE1 B:GLN57 3.6 43.8 1.0 NE2 B:HIS94 3.9 28.4 1.0 ND1 B:HIS14 3.9 31.7 1.0 O B:HOH313 3.9 44.0 1.0 CG B:HIS14 4.2 29.9 1.0 O B:HOH314 4.2 51.2 1.0 ND1 B:HIS84 4.2 26.9 1.0 CD B:GLN57 4.4 41.6 1.0 CE1 B:HIS94 4.4 30.9 1.0 CD2 B:HIS12 4.4 35.2 1.0 OE1 B:GLU86 4.5 33.3 0.5 CG B:HIS84 4.5 26.9 1.0 O2 B:UNL201 4.5 58.5 1.0 NE2 B:HIS12 4.6 35.9 1.0 CG B:GLN57 4.7 36.0 1.0 CA B:HIS12 4.8 26.2 1.0 O1 B:UNL201 4.8 64.0 1.0 CD2 B:HIS94 4.9 27.0 1.0 CE1 B:HIS51 5.0 27.6 1.0 NE2 B:HIS51 5.0 26.1 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.