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Zinc in PDB 2ocu: Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution

Protein crystallography data

The structure of Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution, PDB code: 2ocu was solved by R.Mir, N.Singh, M.Sinha, S.Sharma, P.Kaur, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 63.25 / 2.38
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.216, 50.398, 65.838, 90.00, 107.60, 90.00
R / Rfree (%) 15.7 / 22.3

Other elements in 2ocu:

The structure of Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution (pdb code 2ocu). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution, PDB code: 2ocu:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2ocu

Go back to Zinc Binding Sites List in 2ocu
Zinc binding site 1 out of 2 in the Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1002

b:34.9
occ:1.00
O A:HOH3138 2.0 26.2 1.0
OE2 A:GLU659 2.1 34.1 1.0
OE1 A:GLU659 2.4 28.6 1.0
CD A:GLU659 2.6 32.5 1.0
O A:GLY653 4.0 34.8 1.0
CG A:GLU659 4.1 31.0 1.0
O A:ARG654 4.4 31.5 1.0
CA A:PRO655 4.6 28.6 1.0
N A:THR656 4.9 27.0 1.0
CB A:GLU659 4.9 29.8 1.0

Zinc binding site 2 out of 2 in 2ocu

Go back to Zinc Binding Sites List in 2ocu
Zinc binding site 2 out of 2 in the Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1003

b:40.4
occ:1.00
NE2 A:HIS588 2.0 28.9 1.0
O A:HOH3134 2.0 27.8 1.0
O A:HOH3195 2.2 58.0 1.0
CE1 A:HIS588 2.8 28.1 1.0
CD2 A:HIS588 3.1 29.8 1.0
ND1 A:HIS588 4.0 28.2 1.0
CG A:HIS588 4.2 28.5 1.0
CG2 A:VAL591 4.3 29.1 1.0
O A:HOH3081 4.6 39.5 1.0

Reference:

R.Mir, N.Singh, M.Sinha, S.Sharma, A.Bhushan, P.Kaur, T.P.Singh. Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with N-(4-Hydroxyphenyl) Acetamide at 2.38 A Resolution To Be Published.
Page generated: Thu Oct 17 02:36:18 2024

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