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Zinc in PDB 2mkd: Human Jaz ZF3 Residues 168-227

Zinc Binding Sites:

The binding sites of Zinc atom in the Human Jaz ZF3 Residues 168-227 (pdb code 2mkd). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Human Jaz ZF3 Residues 168-227, PDB code: 2mkd:

Zinc binding site 1 out of 1 in 2mkd

Go back to Zinc Binding Sites List in 2mkd
Zinc binding site 1 out of 1 in the Human Jaz ZF3 Residues 168-227


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human Jaz ZF3 Residues 168-227 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:0.0
occ:1.00
ND1 A:HIS209 2.1 0.0 1.0
NE2 A:HIS203 2.1 0.0 1.0
SG A:CYS190 2.2 0.0 1.0
SG A:CYS187 2.3 0.0 1.0
HB2 A:CYS190 2.7 0.0 1.0
CD2 A:HIS203 2.9 0.0 1.0
CE1 A:HIS209 2.9 0.0 1.0
HD2 A:HIS203 3.0 0.0 1.0
CB A:CYS190 3.0 0.0 1.0
HE1 A:HIS209 3.0 0.0 1.0
CE1 A:HIS203 3.2 0.0 1.0
CG A:HIS209 3.2 0.0 1.0
HA A:HIS209 3.4 0.0 1.0
CB A:CYS187 3.4 0.0 1.0
HB2 A:HIS209 3.5 0.0 1.0
HB3 A:CYS187 3.6 0.0 1.0
H A:CYS190 3.6 0.0 1.0
HE1 A:HIS203 3.6 0.0 1.0
HB2 A:CYS187 3.6 0.0 1.0
HB2 A:LEU189 3.7 0.0 1.0
HB3 A:CYS190 3.7 0.0 1.0
CB A:HIS209 3.8 0.0 1.0
N A:CYS190 4.0 0.0 1.0
CG A:HIS203 4.1 0.0 1.0
NE2 A:HIS209 4.1 0.0 1.0
CA A:HIS209 4.1 0.0 1.0
HD1 A:TYR204 4.2 0.0 1.0
CA A:CYS190 4.2 0.0 1.0
ND1 A:HIS203 4.3 0.0 1.0
CD2 A:HIS209 4.3 0.0 1.0
HZ A:PHE194 4.4 0.0 1.0
HB3 A:ALA192 4.6 0.0 1.0
HE1 A:TYR204 4.6 0.0 1.0
H A:LEU189 4.7 0.0 1.0
CB A:LEU189 4.7 0.0 1.0
HD12 A:LEU189 4.8 0.0 1.0
CA A:CYS187 4.8 0.0 1.0
HB3 A:HIS209 4.8 0.0 1.0
HA A:TYR204 4.8 0.0 1.0
HA A:CYS190 4.8 0.0 1.0
C A:LEU189 4.8 0.0 1.0
O A:HIS209 5.0 0.0 1.0

Reference:

R.G.Burge, M.A.Martinez-Yamout, H.J.Dyson, P.E.Wright. Structural Characterization of Interactions Between the Double-Stranded Rna-Binding Zinc Finger Protein Jaz and Nucleic Acids. Biochemistry V. 53 1495 2014.
ISSN: ISSN 0006-2960
PubMed: 24521053
DOI: 10.1021/BI401675H
Page generated: Wed Dec 16 03:40:15 2020

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