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Zinc in PDB 2m85: Phd Domain From Human Shprh

Zinc Binding Sites:

The binding sites of Zinc atom in the Phd Domain From Human Shprh (pdb code 2m85). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Phd Domain From Human Shprh, PDB code: 2m85:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2m85

Go back to Zinc Binding Sites List in 2m85
Zinc binding site 1 out of 2 in the Phd Domain From Human Shprh


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Phd Domain From Human Shprh within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn801

b:0.0
occ:1.00
ND1 A:HIS685 2.1 0.0 1.0
SG A:CYS661 2.3 0.0 1.0
SG A:CYS688 2.4 0.0 1.0
SG A:CYS663 2.4 0.0 1.0
HB2 A:HIS685 2.6 0.0 1.0
CG A:HIS685 3.0 0.0 1.0
CE1 A:HIS685 3.0 0.0 1.0
HE1 A:HIS685 3.3 0.0 1.0
CB A:HIS685 3.3 0.0 1.0
HB3 A:CYS661 3.4 0.0 1.0
HB2 A:CYS688 3.4 0.0 1.0
H A:CYS663 3.5 0.0 1.0
CB A:CYS661 3.5 0.0 1.0
CB A:CYS688 3.5 0.0 1.0
HB3 A:CYS663 3.5 0.0 1.0
CB A:CYS663 3.6 0.0 1.0
H A:HIS685 3.7 0.0 1.0
HB3 A:CYS688 3.8 0.0 1.0
HB2 A:CYS661 4.0 0.0 1.0
HB3 A:HIS685 4.0 0.0 1.0
CD2 A:HIS685 4.2 0.0 1.0
NE2 A:HIS685 4.2 0.0 1.0
N A:CYS663 4.3 0.0 1.0
N A:HIS685 4.3 0.0 1.0
HB2 A:CYS663 4.4 0.0 1.0
CA A:HIS685 4.5 0.0 1.0
CA A:CYS663 4.6 0.0 1.0
HG3 A:GLN684 4.6 0.0 1.0
H A:GLY664 4.6 0.0 1.0
H A:GLU665 4.7 0.0 1.0
CA A:CYS661 4.7 0.0 1.0
H A:ILE662 4.8 0.0 1.0
HB2 A:GLU665 4.8 0.0 1.0
C A:CYS661 4.8 0.0 1.0
HG2 A:GLU665 4.9 0.0 1.0
CA A:CYS688 4.9 0.0 1.0
N A:ILE662 5.0 0.0 1.0
O A:LEU666 5.0 0.0 1.0
HG13 A:ILE662 5.0 0.0 1.0
HE2 A:HIS685 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2m85

Go back to Zinc Binding Sites List in 2m85
Zinc binding site 2 out of 2 in the Phd Domain From Human Shprh


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Phd Domain From Human Shprh within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn802

b:0.0
occ:1.00
SG A:CYS706 2.3 0.0 1.0
SG A:CYS677 2.3 0.0 1.0
SG A:CYS680 2.3 0.0 1.0
SG A:CYS703 2.4 0.0 1.0
H A:CYS703 3.2 0.0 1.0
HB2 A:CYS706 3.3 0.0 1.0
HB3 A:CYS680 3.5 0.0 1.0
HB3 A:CYS677 3.5 0.0 1.0
HB3 A:LEU682 3.5 0.0 1.0
CB A:CYS706 3.5 0.0 1.0
CB A:CYS677 3.5 0.0 1.0
HB3 A:CYS703 3.6 0.0 1.0
CB A:CYS680 3.6 0.0 1.0
CB A:CYS703 3.6 0.0 1.0
HB3 A:LYS679 3.8 0.0 1.0
H A:CYS706 3.9 0.0 1.0
H A:CYS680 3.9 0.0 1.0
HB2 A:CYS677 3.9 0.0 1.0
N A:CYS703 4.0 0.0 1.0
HB2 A:LEU682 4.1 0.0 1.0
HB3 A:TYR702 4.2 0.0 1.0
N A:CYS680 4.2 0.0 1.0
HB3 A:CYS706 4.2 0.0 1.0
CB A:LEU682 4.3 0.0 1.0
O A:CYS703 4.3 0.0 1.0
CA A:CYS703 4.3 0.0 1.0
HG A:LEU682 4.3 0.0 1.0
HB2 A:CYS680 4.4 0.0 1.0
N A:CYS706 4.4 0.0 1.0
CA A:CYS680 4.5 0.0 1.0
HB2 A:CYS703 4.5 0.0 1.0
HD1 A:TYR702 4.5 0.0 1.0
CA A:CYS706 4.5 0.0 1.0
HG2 A:LYS679 4.6 0.0 1.0
O A:CYS677 4.7 0.0 1.0
HD13 A:LEU682 4.7 0.0 1.0
HB3 A:HIS705 4.7 0.0 1.0
C A:CYS703 4.7 0.0 1.0
HA A:TYR702 4.8 0.0 1.0
CB A:LYS679 4.8 0.0 1.0
H A:LEU682 4.8 0.0 1.0
HA A:CYS706 4.8 0.0 1.0
CG A:LEU682 4.8 0.0 1.0
CA A:CYS677 4.9 0.0 1.0
C A:LYS679 4.9 0.0 1.0

Reference:

L.E.Machado, Y.Pustovalova, A.C.Kile, A.Pozhidaeva, K.A.Cimprich, F.C.Almeida, I.Bezsonova, D.M.Korzhnev. Phd Domain From Human Shprh. J.Biomol.uc(Nmr) V. 56 393 2013.
ISSN: ISSN 0925-2738
PubMed: 23907177
DOI: 10.1007/S10858-013-9758-2
Page generated: Wed Dec 16 03:39:48 2020

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