Zinc in PDB 2m7q: Solution Structure of TAX1BP1 UBZ1+2
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of TAX1BP1 UBZ1+2
(pdb code 2m7q). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of TAX1BP1 UBZ1+2, PDB code: 2m7q:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2m7q
Go back to
Zinc Binding Sites List in 2m7q
Zinc binding site 1 out
of 2 in the Solution Structure of TAX1BP1 UBZ1+2
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of TAX1BP1 UBZ1+2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn101
b:0.0
occ:1.00
|
NE2
|
A:HIS29
|
2.0
|
0.0
|
1.0
|
NE2
|
A:HIS33
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS10
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS13
|
2.3
|
0.0
|
1.0
|
CE1
|
A:HIS33
|
2.7
|
0.0
|
1.0
|
CD2
|
A:HIS29
|
2.8
|
0.0
|
1.0
|
CD2
|
A:HIS33
|
2.8
|
0.0
|
1.0
|
CE1
|
A:HIS29
|
3.0
|
0.0
|
1.0
|
HD2
|
A:HIS29
|
3.0
|
0.0
|
1.0
|
HE1
|
A:HIS33
|
3.0
|
0.0
|
1.0
|
HB3
|
A:CYS10
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS10
|
3.2
|
0.0
|
1.0
|
HD2
|
A:HIS33
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS13
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS10
|
3.3
|
0.0
|
1.0
|
HE1
|
A:HIS29
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS13
|
3.4
|
0.0
|
1.0
|
H
|
A:CYS13
|
3.6
|
0.0
|
1.0
|
ND1
|
A:HIS33
|
3.7
|
0.0
|
1.0
|
CG
|
A:HIS33
|
3.7
|
0.0
|
1.0
|
CG
|
A:HIS29
|
3.9
|
0.0
|
1.0
|
ND1
|
A:HIS29
|
3.9
|
0.0
|
1.0
|
HB2
|
A:LEU12
|
4.0
|
0.0
|
1.0
|
HB2
|
A:LEU15
|
4.0
|
0.0
|
1.0
|
HB3
|
A:LEU15
|
4.0
|
0.0
|
1.0
|
N
|
A:CYS13
|
4.1
|
0.0
|
1.0
|
H
|
A:LEU15
|
4.1
|
0.0
|
1.0
|
HB2
|
A:CYS13
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS13
|
4.3
|
0.0
|
1.0
|
HD1
|
A:HIS33
|
4.5
|
0.0
|
1.0
|
CB
|
A:LEU15
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS10
|
4.6
|
0.0
|
1.0
|
O
|
A:HIS29
|
4.7
|
0.0
|
1.0
|
HD22
|
A:LEU15
|
4.8
|
0.0
|
1.0
|
HD1
|
A:HIS29
|
4.8
|
0.0
|
1.0
|
H
|
A:LEU12
|
4.8
|
0.0
|
1.0
|
H
|
A:GLU14
|
4.8
|
0.0
|
1.0
|
C
|
A:LEU12
|
4.9
|
0.0
|
1.0
|
N
|
A:LEU15
|
5.0
|
0.0
|
1.0
|
C
|
A:CYS13
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2m7q
Go back to
Zinc Binding Sites List in 2m7q
Zinc binding site 2 out
of 2 in the Solution Structure of TAX1BP1 UBZ1+2
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of TAX1BP1 UBZ1+2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn102
b:0.0
occ:1.00
|
NE2
|
A:HIS60
|
2.0
|
0.0
|
1.0
|
NE2
|
A:HIS56
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS40
|
2.3
|
0.0
|
1.0
|
HE1
|
A:HIS60
|
2.3
|
0.0
|
1.0
|
CE1
|
A:HIS60
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS37
|
2.3
|
0.0
|
1.0
|
CE1
|
A:HIS56
|
2.7
|
0.0
|
1.0
|
HB2
|
A:CYS40
|
2.8
|
0.0
|
1.0
|
CD2
|
A:HIS56
|
2.9
|
0.0
|
1.0
|
CD2
|
A:HIS60
|
3.0
|
0.0
|
1.0
|
HE1
|
A:HIS56
|
3.0
|
0.0
|
1.0
|
CB
|
A:CYS40
|
3.2
|
0.0
|
1.0
|
HD2
|
A:HIS56
|
3.3
|
0.0
|
1.0
|
ND1
|
A:HIS60
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS37
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS37
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS37
|
3.5
|
0.0
|
1.0
|
HD2
|
A:HIS60
|
3.6
|
0.0
|
1.0
|
CG
|
A:HIS60
|
3.7
|
0.0
|
1.0
|
ND1
|
A:HIS56
|
3.7
|
0.0
|
1.0
|
CG
|
A:HIS56
|
3.8
|
0.0
|
1.0
|
HB3
|
A:CYS40
|
3.9
|
0.0
|
1.0
|
HE1
|
A:PHE44
|
4.0
|
0.0
|
1.0
|
HD1
|
A:HIS60
|
4.1
|
0.0
|
1.0
|
H
|
A:CYS40
|
4.2
|
0.0
|
1.0
|
N
|
A:CYS40
|
4.2
|
0.0
|
1.0
|
HZ
|
A:PHE44
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS40
|
4.3
|
0.0
|
1.0
|
HA
|
A:VAL57
|
4.3
|
0.0
|
1.0
|
HB2
|
A:MET39
|
4.4
|
0.0
|
1.0
|
HD1
|
A:HIS56
|
4.5
|
0.0
|
1.0
|
HA
|
A:CYS40
|
4.6
|
0.0
|
1.0
|
O
|
A:HIS56
|
4.7
|
0.0
|
1.0
|
C
|
A:MET39
|
4.7
|
0.0
|
1.0
|
HG22
|
A:VAL57
|
4.8
|
0.0
|
1.0
|
CE1
|
A:PHE44
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS37
|
4.8
|
0.0
|
1.0
|
CZ
|
A:PHE44
|
4.9
|
0.0
|
1.0
|
HB2
|
A:GLU42
|
4.9
|
0.0
|
1.0
|
C
|
A:HIS56
|
5.0
|
0.0
|
1.0
|
|
Reference:
M.A.Ceregido,
M.Spinola Amilibia,
L.Buts,
J.Rivera-Torres,
A.Garcia-Pino,
J.Bravo,
N.A.J.Van Nuland.
The Structure of TAX1BP1 UBZ1+2 Provides Insight Into Target Specificity and Adaptability J.Mol.Biol. 2013.
ISSN: ESSN 1089-8638
PubMed: 24239949
DOI: 10.1016/J.JMB.2013.11.006
Page generated: Thu Oct 17 02:01:41 2024
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