Zinc in PDB 2m5t: Solution Structure of the 2A Proteinase From A Common Cold Agent, Human Rhinovirus Rv-C02, Strain W12

The binding sites of Zinc atom in the Solution Structure of the 2A Proteinase From A Common Cold Agent, Human Rhinovirus Rv-C02, Strain W12 (pdb code 2m5t). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the 2A Proteinase From A Common Cold Agent, Human Rhinovirus Rv-C02, Strain W12, PDB code: 2m5t:

Zinc binding site 1 out of 1 in the Solution Structure of the 2A Proteinase From A Common Cold Agent, Human Rhinovirus Rv-C02, Strain W12


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the 2A Proteinase From A Common Cold Agent, Human Rhinovirus Rv-C02, Strain W12 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:32.5 occ:1.00 NE2 A:HIS113 2.4 64.2 1.0 SG A:CYS53 2.4 75.1 1.0 CD2 A:HIS113 2.6 54.4 1.0 SG A:CYS51 2.6 24.2 1.0 SG A:CYS111 2.7 62.2 1.0 HD2 A:HIS113 2.7 65.3 1.0 H A:CYS53 2.8 11.4 1.0 CE1 A:HIS113 3.2 14.2 1.0 HB3 A:CYS51 3.3 71.4 1.0 O A:CYS51 3.4 14.3 1.0 HB2 A:ARG112 3.5 3.2 1.0 CG A:HIS113 3.5 21.2 1.0 H A:HIS113 3.5 51.1 1.0 CB A:CYS51 3.6 41.1 1.0 N A:CYS53 3.6 22.2 1.0 CB A:CYS53 3.7 11.3 1.0 C A:CYS51 3.7 21.3 1.0 HG21 A:ILE116 3.7 40.3 1.0 ND1 A:HIS113 3.8 14.0 1.0 HB2 A:CYS53 3.8 4.1 1.0 HE1 A:HIS113 3.8 52.3 1.0 HB2 A:CYS111 3.9 35.3 1.0 CB A:CYS111 4.0 42.0 1.0 CA A:CYS53 4.2 50.1 1.0 HA A:ASP52 4.2 61.4 1.0 H A:ARG112 4.2 61.3 1.0 N A:ASP52 4.3 23.4 1.0 CA A:CYS51 4.3 4.2 1.0 N A:HIS113 4.4 33.4 1.0 HB2 A:CYS51 4.5 53.3 1.0 HA A:CYS53 4.5 45.0 1.0 CB A:ARG112 4.5 35.3 1.0 C A:ASP52 4.5 54.4 1.0 HD11 A:ILE116 4.5 4.3 1.0 N A:ARG112 4.5 14.2 1.0 HB3 A:CYS111 4.5 33.1 1.0 CG2 A:ILE116 4.5 71.5 1.0 CA A:ASP52 4.5 42.0 1.0 HB3 A:CYS53 4.6 10.4 1.0 HB2 A:HIS113 4.6 4.3 1.0 HD1 A:HIS113 4.6 11.4 1.0 HG23 A:ILE116 4.6 43.3 1.0 CB A:HIS113 4.6 43.4 1.0 HG2 A:ARG112 4.6 33.2 1.0 HG22 A:ILE116 4.7 5.1 1.0 H A:GLY114 4.8 51.1 1.0 H A:CYS51 4.8 55.4 1.0 H A:ASP52 4.8 61.3 1.0 HG3 A:ARG112 4.9 73.4 1.0 CG A:ARG112 4.9 4.2 1.0 CA A:ARG112 5.0 54.1 1.0

W.Lee, K.E.Watters, A.T.Troupis, N.M.Reinen, F.P.Suchy, K.L.Moyer, R.O.Frederick, M.Tonelli, D.J.Aceti, A.C.Palmenberg, J.L.Markley. Solution Structure of the 2A Protease From A Common Cold Agent, Human Rhinovirus C2, Strain W12. Plos One V. 9 97198 2014.
ISSN: ESSN 1932-6203
PubMed: 24937088
DOI: 10.1371/JOURNAL.PONE.0097198