Zinc in PDB 2lxd: Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid)
Zinc Binding Sites:
The binding sites of Zinc atom in the Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid)
(pdb code 2lxd). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid), PDB code: 2lxd:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2lxd
Go back to
Zinc Binding Sites List in 2lxd
Zinc binding site 1 out
of 2 in the Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid)
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:1.0
occ:1.00
|
ND1
|
A:HIS33
|
2.1
|
42.4
|
1.0
|
SG
|
A:CYS11
|
2.2
|
22.2
|
1.0
|
SG
|
A:CYS14
|
2.3
|
34.4
|
1.0
|
SG
|
A:CYS36
|
2.3
|
11.3
|
1.0
|
HB2
|
A:HIS33
|
2.6
|
74.3
|
1.0
|
HB3
|
A:CYS11
|
2.9
|
38.2
|
1.0
|
CG
|
A:HIS33
|
3.0
|
34.4
|
1.0
|
CB
|
A:CYS11
|
3.0
|
74.5
|
1.0
|
H
|
A:HIS33
|
3.1
|
23.2
|
1.0
|
CE1
|
A:HIS33
|
3.1
|
61.4
|
1.0
|
HB3
|
A:CYS14
|
3.2
|
38.2
|
1.0
|
HB2
|
A:CYS11
|
3.2
|
21.3
|
1.0
|
CB
|
A:HIS33
|
3.3
|
25.4
|
1.0
|
H
|
A:CYS14
|
3.3
|
73.2
|
1.0
|
CB
|
A:CYS14
|
3.4
|
1.5
|
1.0
|
HB2
|
A:CYS36
|
3.4
|
20.3
|
1.0
|
HE1
|
A:HIS33
|
3.4
|
32.3
|
1.0
|
CB
|
A:CYS36
|
3.4
|
50.4
|
1.0
|
HB3
|
A:CYS36
|
3.6
|
38.2
|
1.0
|
N
|
A:HIS33
|
3.9
|
54.2
|
1.0
|
HB3
|
A:LYS16
|
4.0
|
38.2
|
1.0
|
HB3
|
A:HIS33
|
4.0
|
38.2
|
1.0
|
N
|
A:CYS14
|
4.1
|
65.0
|
1.0
|
HB3
|
A:SER13
|
4.1
|
38.2
|
1.0
|
CD2
|
A:HIS33
|
4.2
|
51.3
|
1.0
|
HB2
|
A:CYS14
|
4.2
|
33.4
|
1.0
|
NE2
|
A:HIS33
|
4.2
|
4.3
|
1.0
|
CA
|
A:HIS33
|
4.2
|
23.5
|
1.0
|
CA
|
A:CYS14
|
4.3
|
43.1
|
1.0
|
H
|
A:LYS16
|
4.5
|
64.4
|
1.0
|
CA
|
A:CYS11
|
4.5
|
71.2
|
1.0
|
HA
|
A:TYR32
|
4.6
|
0.1
|
1.0
|
H
|
A:SER13
|
4.7
|
12.0
|
1.0
|
H
|
A:CYS36
|
4.7
|
64.1
|
1.0
|
CA
|
A:CYS36
|
4.8
|
34.3
|
1.0
|
HB3
|
A:TYR32
|
4.8
|
38.2
|
1.0
|
CB
|
A:LYS16
|
4.9
|
12.2
|
1.0
|
HA
|
A:CYS11
|
4.9
|
25.2
|
1.0
|
HB2
|
A:LYS16
|
4.9
|
75.4
|
1.0
|
HA
|
A:HIS33
|
4.9
|
61.3
|
1.0
|
H
|
A:ASP15
|
4.9
|
22.2
|
1.0
|
O
|
A:CYS11
|
5.0
|
55.1
|
1.0
|
C
|
A:CYS14
|
5.0
|
42.2
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2lxd
Go back to
Zinc Binding Sites List in 2lxd
Zinc binding site 2 out
of 2 in the Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid)
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn202
b:1.0
occ:1.00
|
OD1
|
A:ASP64
|
1.9
|
12.1
|
1.0
|
SG
|
A:CYS61
|
2.3
|
20.4
|
1.0
|
SG
|
A:CYS39
|
2.3
|
74.5
|
1.0
|
SG
|
A:CYS42
|
2.3
|
0.2
|
1.0
|
CG
|
A:ASP64
|
2.9
|
4.2
|
1.0
|
H
|
A:CYS61
|
3.0
|
12.3
|
1.0
|
HB2
|
A:CYS42
|
3.1
|
34.3
|
1.0
|
H
|
A:CYS42
|
3.2
|
20.4
|
1.0
|
CB
|
A:CYS42
|
3.3
|
20.1
|
1.0
|
CB
|
A:CYS61
|
3.4
|
70.1
|
1.0
|
H
|
A:ASP64
|
3.4
|
34.5
|
1.0
|
HB3
|
A:CYS61
|
3.4
|
38.2
|
1.0
|
CB
|
A:CYS39
|
3.5
|
24.4
|
1.0
|
HB2
|
A:CYS39
|
3.5
|
12.1
|
1.0
|
HB3
|
A:ALA41
|
3.6
|
61.5
|
1.0
|
HB3
|
A:GLN63
|
3.6
|
38.2
|
1.0
|
HB3
|
A:CYS39
|
3.6
|
38.2
|
1.0
|
OD2
|
A:ASP64
|
3.6
|
3.5
|
1.0
|
N
|
A:CYS61
|
3.6
|
14.5
|
1.0
|
HB3
|
A:ASP64
|
3.7
|
38.2
|
1.0
|
N
|
A:CYS42
|
3.9
|
72.2
|
1.0
|
CB
|
A:ASP64
|
3.9
|
42.3
|
1.0
|
CA
|
A:CYS61
|
4.0
|
43.4
|
1.0
|
O
|
A:CYS61
|
4.1
|
72.4
|
1.0
|
HG11
|
A:VAL60
|
4.1
|
75.5
|
1.0
|
HB3
|
A:CYS42
|
4.1
|
38.2
|
1.0
|
N
|
A:ASP64
|
4.2
|
30.1
|
1.0
|
H
|
A:ALA41
|
4.2
|
22.1
|
1.0
|
CA
|
A:CYS42
|
4.2
|
41.4
|
1.0
|
HA
|
A:VAL60
|
4.3
|
33.3
|
1.0
|
C
|
A:CYS61
|
4.3
|
30.2
|
1.0
|
HB2
|
A:CYS61
|
4.3
|
22.0
|
1.0
|
H
|
A:GLN63
|
4.4
|
23.3
|
1.0
|
CB
|
A:GLN63
|
4.5
|
43.3
|
1.0
|
HB2
|
A:GLN63
|
4.5
|
51.1
|
1.0
|
CB
|
A:ALA41
|
4.6
|
50.5
|
1.0
|
CA
|
A:ASP64
|
4.7
|
1.4
|
1.0
|
C
|
A:VAL60
|
4.7
|
4.4
|
1.0
|
HB2
|
A:ASP64
|
4.8
|
15.4
|
1.0
|
HZ
|
A:PHE46
|
4.8
|
62.4
|
1.0
|
HG12
|
A:VAL60
|
4.8
|
0.3
|
1.0
|
H
|
A:GLN43
|
4.8
|
34.4
|
1.0
|
C
|
A:ALA41
|
4.9
|
11.5
|
1.0
|
CA
|
A:CYS39
|
4.9
|
3.5
|
1.0
|
CG1
|
A:VAL60
|
4.9
|
72.2
|
1.0
|
HA
|
A:CYS42
|
4.9
|
44.4
|
1.0
|
HA
|
A:CYS61
|
5.0
|
15.3
|
1.0
|
N
|
A:ALA41
|
5.0
|
62.4
|
1.0
|
N
|
A:GLN63
|
5.0
|
51.3
|
1.0
|
|
Reference:
S.Dastmalchi,
L.Wilkinson-White,
A.H.Kwan,
R.Gamsjaeger,
J.P.Mackay,
J.M.Matthews.
Solution Structure of A Tethered LMO2(LIM2) /LDB1(Lid) Complex Protein Sci. 2012.
ISSN: ESSN 1469-896X
PubMed: 22936624
DOI: 10.1002/PRO.2153
Page generated: Thu Oct 17 01:56:48 2024
|