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Zinc in PDB 2lxd: Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid)

Zinc Binding Sites:

The binding sites of Zinc atom in the Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid) (pdb code 2lxd). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid), PDB code: 2lxd:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2lxd

Go back to Zinc Binding Sites List in 2lxd
Zinc binding site 1 out of 2 in the Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:1.0
occ:1.00
ND1 A:HIS33 2.1 42.4 1.0
SG A:CYS11 2.2 22.2 1.0
SG A:CYS14 2.3 34.4 1.0
SG A:CYS36 2.3 11.3 1.0
HB2 A:HIS33 2.6 74.3 1.0
HB3 A:CYS11 2.9 38.2 1.0
CG A:HIS33 3.0 34.4 1.0
CB A:CYS11 3.0 74.5 1.0
H A:HIS33 3.1 23.2 1.0
CE1 A:HIS33 3.1 61.4 1.0
HB3 A:CYS14 3.2 38.2 1.0
HB2 A:CYS11 3.2 21.3 1.0
CB A:HIS33 3.3 25.4 1.0
H A:CYS14 3.3 73.2 1.0
CB A:CYS14 3.4 1.5 1.0
HB2 A:CYS36 3.4 20.3 1.0
HE1 A:HIS33 3.4 32.3 1.0
CB A:CYS36 3.4 50.4 1.0
HB3 A:CYS36 3.6 38.2 1.0
N A:HIS33 3.9 54.2 1.0
HB3 A:LYS16 4.0 38.2 1.0
HB3 A:HIS33 4.0 38.2 1.0
N A:CYS14 4.1 65.0 1.0
HB3 A:SER13 4.1 38.2 1.0
CD2 A:HIS33 4.2 51.3 1.0
HB2 A:CYS14 4.2 33.4 1.0
NE2 A:HIS33 4.2 4.3 1.0
CA A:HIS33 4.2 23.5 1.0
CA A:CYS14 4.3 43.1 1.0
H A:LYS16 4.5 64.4 1.0
CA A:CYS11 4.5 71.2 1.0
HA A:TYR32 4.6 0.1 1.0
H A:SER13 4.7 12.0 1.0
H A:CYS36 4.7 64.1 1.0
CA A:CYS36 4.8 34.3 1.0
HB3 A:TYR32 4.8 38.2 1.0
CB A:LYS16 4.9 12.2 1.0
HA A:CYS11 4.9 25.2 1.0
HB2 A:LYS16 4.9 75.4 1.0
HA A:HIS33 4.9 61.3 1.0
H A:ASP15 4.9 22.2 1.0
O A:CYS11 5.0 55.1 1.0
C A:CYS14 5.0 42.2 1.0

Zinc binding site 2 out of 2 in 2lxd

Go back to Zinc Binding Sites List in 2lxd
Zinc binding site 2 out of 2 in the Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Backbone 1H, 13C, and 15N Chemical Shift Assignments For LMO2(LIM2)- LDB1(Lid) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn202

b:1.0
occ:1.00
OD1 A:ASP64 1.9 12.1 1.0
SG A:CYS61 2.3 20.4 1.0
SG A:CYS39 2.3 74.5 1.0
SG A:CYS42 2.3 0.2 1.0
CG A:ASP64 2.9 4.2 1.0
H A:CYS61 3.0 12.3 1.0
HB2 A:CYS42 3.1 34.3 1.0
H A:CYS42 3.2 20.4 1.0
CB A:CYS42 3.3 20.1 1.0
CB A:CYS61 3.4 70.1 1.0
H A:ASP64 3.4 34.5 1.0
HB3 A:CYS61 3.4 38.2 1.0
CB A:CYS39 3.5 24.4 1.0
HB2 A:CYS39 3.5 12.1 1.0
HB3 A:ALA41 3.6 61.5 1.0
HB3 A:GLN63 3.6 38.2 1.0
HB3 A:CYS39 3.6 38.2 1.0
OD2 A:ASP64 3.6 3.5 1.0
N A:CYS61 3.6 14.5 1.0
HB3 A:ASP64 3.7 38.2 1.0
N A:CYS42 3.9 72.2 1.0
CB A:ASP64 3.9 42.3 1.0
CA A:CYS61 4.0 43.4 1.0
O A:CYS61 4.1 72.4 1.0
HG11 A:VAL60 4.1 75.5 1.0
HB3 A:CYS42 4.1 38.2 1.0
N A:ASP64 4.2 30.1 1.0
H A:ALA41 4.2 22.1 1.0
CA A:CYS42 4.2 41.4 1.0
HA A:VAL60 4.3 33.3 1.0
C A:CYS61 4.3 30.2 1.0
HB2 A:CYS61 4.3 22.0 1.0
H A:GLN63 4.4 23.3 1.0
CB A:GLN63 4.5 43.3 1.0
HB2 A:GLN63 4.5 51.1 1.0
CB A:ALA41 4.6 50.5 1.0
CA A:ASP64 4.7 1.4 1.0
C A:VAL60 4.7 4.4 1.0
HB2 A:ASP64 4.8 15.4 1.0
HZ A:PHE46 4.8 62.4 1.0
HG12 A:VAL60 4.8 0.3 1.0
H A:GLN43 4.8 34.4 1.0
C A:ALA41 4.9 11.5 1.0
CA A:CYS39 4.9 3.5 1.0
CG1 A:VAL60 4.9 72.2 1.0
HA A:CYS42 4.9 44.4 1.0
HA A:CYS61 5.0 15.3 1.0
N A:ALA41 5.0 62.4 1.0
N A:GLN63 5.0 51.3 1.0

Reference:

S.Dastmalchi, L.Wilkinson-White, A.H.Kwan, R.Gamsjaeger, J.P.Mackay, J.M.Matthews. Solution Structure of A Tethered LMO2(LIM2) /LDB1(Lid) Complex Protein Sci. 2012.
ISSN: ESSN 1469-896X
PubMed: 22936624
DOI: 10.1002/PRO.2153
Page generated: Wed Dec 16 03:38:51 2020

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