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Zinc in PDB 2li9: Metal Binding Domain of Rat Beta-Amyloid

Zinc Binding Sites:

The binding sites of Zinc atom in the Metal Binding Domain of Rat Beta-Amyloid (pdb code 2li9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Metal Binding Domain of Rat Beta-Amyloid, PDB code: 2li9:

Zinc binding site 1 out of 1 in 2li9

Go back to Zinc Binding Sites List in 2li9
Zinc binding site 1 out of 1 in the Metal Binding Domain of Rat Beta-Amyloid


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Metal Binding Domain of Rat Beta-Amyloid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn18

b:0.0
occ:1.00
NE2 A:HIS14 2.1 0.0 1.0
NE2 B:HIS14 2.1 0.0 1.0
ND1 A:HIS6 2.1 0.0 1.0
ND1 B:HIS6 2.1 0.0 1.0
CE1 A:HIS14 2.8 0.0 1.0
HE1 B:HIS14 2.8 0.0 1.0
CE1 B:HIS14 2.8 0.0 1.0
HE1 A:HIS14 2.8 0.0 1.0
O B:SER8 3.0 0.0 1.0
O A:SER8 3.1 0.0 1.0
CE1 B:HIS6 3.1 0.0 1.0
CE1 A:HIS6 3.1 0.0 1.0
HB2 A:HIS6 3.2 0.0 1.0
CG A:HIS6 3.2 0.0 1.0
HE1 B:HIS6 3.2 0.0 1.0
CG B:HIS6 3.2 0.0 1.0
HB2 B:HIS6 3.3 0.0 1.0
HE1 A:HIS6 3.3 0.0 1.0
CD2 A:HIS14 3.3 0.0 1.0
CD2 B:HIS14 3.3 0.0 1.0
CB A:HIS6 3.7 0.0 1.0
CB B:HIS6 3.7 0.0 1.0
HD2 A:HIS14 3.8 0.0 1.0
HD2 B:HIS14 3.8 0.0 1.0
HA A:HIS6 3.9 0.0 1.0
HA B:HIS6 3.9 0.0 1.0
HA3 A:GLY9 3.9 0.0 1.0
HA3 B:GLY9 3.9 0.0 1.0
ND1 A:HIS14 4.0 0.0 1.0
ND1 B:HIS14 4.0 0.0 1.0
C B:SER8 4.2 0.0 1.0
C A:SER8 4.2 0.0 1.0
NE2 B:HIS6 4.3 0.0 1.0
NE2 A:HIS6 4.3 0.0 1.0
CG A:HIS14 4.3 0.0 1.0
CG B:HIS14 4.3 0.0 1.0
CD2 A:HIS6 4.3 0.0 1.0
CD2 B:HIS6 4.3 0.0 1.0
CA A:HIS6 4.4 0.0 1.0
CA B:HIS6 4.4 0.0 1.0
H B:SER8 4.5 0.0 1.0
HB3 A:HIS6 4.6 0.0 1.0
HB3 B:HIS6 4.7 0.0 1.0
HD1 A:HIS14 4.8 0.0 1.0
HD1 B:HIS14 4.9 0.0 1.0
CA A:GLY9 4.9 0.0 1.0
CA B:GLY9 4.9 0.0 1.0
H A:ASP7 4.9 0.0 1.0
H B:ASP7 4.9 0.0 1.0
N B:GLY9 5.0 0.0 1.0
HB1 A:ALA2 5.0 0.0 1.0

Reference:

A.N.Istrate, P.O.Tsvetkov, A.B.Mantsyzov, A.A.Kulikova, S.A.Kozin, A.A.Makarov, V.I.Polshakov. uc(Nmr) Solution Structure of Rat Abeta(1-16): Toward Understanding the Mechanism of Rats' Resistance to Alzheimer'S Disease. Biophys.J. V. 102 136 2012.
ISSN: ISSN 0006-3495
PubMed: 22225807
DOI: 10.1016/J.BPJ.2011.11.4006
Page generated: Wed Dec 16 03:37:36 2020

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