Zinc in PDB 2l80: Solution Structure of the Zinc Finger Domain of USP13

The binding sites of Zinc atom in the Solution Structure of the Zinc Finger Domain of USP13 (pdb code 2l80). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the Zinc Finger Domain of USP13, PDB code: 2l80:

Zinc binding site 1 out of 1 in the Solution Structure of the Zinc Finger Domain of USP13


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Zinc Finger Domain of USP13 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn124 b:0.6 occ:1.00 NE2 A:HIS57 2.0 1.2 1.0 SG A:CYS44 2.3 0.7 1.0 SG A:CYS24 2.3 0.8 1.0 SG A:CYS27 2.3 0.8 1.0 CE1 A:HIS57 2.9 1.9 1.0 CD2 A:HIS57 3.0 0.8 1.0 H A:CYS27 3.0 0.7 1.0 HE1 A:HIS57 3.1 2.8 1.0 HA2 A:GLY54 3.2 0.9 1.0 HB2 A:CYS27 3.2 0.7 1.0 HB3 A:CYS44 3.2 0.5 1.0 HD2 A:HIS57 3.2 1.5 1.0 HB2 A:CYS24 3.2 0.9 1.0 H A:CYS44 3.3 0.5 1.0 CB A:CYS44 3.3 0.5 1.0 CB A:CYS24 3.3 0.5 1.0 CB A:CYS27 3.4 0.8 1.0 HB3 A:CYS24 3.5 0.9 1.0 N A:CYS44 3.6 0.4 1.0 HD12 A:LEU29 3.6 0.5 1.0 H A:ASN55 3.7 1.4 1.0 HB2 A:LEU29 3.8 0.5 1.0 N A:CYS27 3.8 0.8 1.0 CA A:CYS44 3.9 0.5 1.0 H A:GLY54 3.9 0.9 1.0 ND1 A:HIS57 4.0 1.7 1.0 CG A:HIS57 4.1 0.7 1.0 CA A:CYS27 4.1 0.8 1.0 CA A:GLY54 4.1 0.9 1.0 HB2 A:CYS44 4.2 0.6 1.0 HB3 A:CYS27 4.2 0.9 1.0 HB3 A:ARG26 4.3 1.1 1.0 N A:ASN55 4.3 0.9 1.0 HA A:LEU43 4.4 0.3 1.0 HB2 A:ARG26 4.4 0.9 1.0 C A:LEU43 4.4 0.3 1.0 N A:GLY54 4.4 0.9 1.0 H A:LEU29 4.4 0.6 1.0 C A:CYS44 4.4 0.6 1.0 HD22 A:LEU33 4.5 0.3 1.0 C A:CYS27 4.5 0.8 1.0 O A:CYS27 4.6 0.8 1.0 O A:CYS44 4.6 0.7 1.0 C A:GLY54 4.6 0.9 1.0 CD1 A:LEU29 4.7 0.5 1.0 CA A:CYS24 4.7 0.4 1.0 H A:ARG26 4.7 0.7 1.0 HB3 A:LEU43 4.8 0.5 1.0 O A:ASN55 4.8 1.2 1.0 CB A:LEU29 4.8 0.5 1.0 CB A:ARG26 4.8 1.0 1.0 HD1 A:HIS57 4.9 2.4 1.0 CA A:LEU43 4.9 0.3 1.0 HA A:CYS44 4.9 0.4 1.0 HA3 A:GLY54 4.9 1.0 1.0 C A:ARG26 4.9 0.8 1.0 HB2 A:ASN55 4.9 0.9 1.0 HG A:LEU29 5.0 0.5 1.0 H A:CYS24 5.0 0.4 1.0

Y.Zhang, A.Song, C.Zhou, Z.Zhou, H.Hu. Biochemical Characterization of the Ubiquitin Receptors in USP13 Reveals Different Catalytic Activation of Deubiquitination From Its Analogue USP5 To Be Published.