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Zinc in PDB 2l7x: Crimean Congo Hemorrhagic Fever Gn Zinc Finger

Zinc Binding Sites:

The binding sites of Zinc atom in the Crimean Congo Hemorrhagic Fever Gn Zinc Finger (pdb code 2l7x). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crimean Congo Hemorrhagic Fever Gn Zinc Finger, PDB code: 2l7x:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2l7x

Go back to Zinc Binding Sites List in 2l7x
Zinc binding site 1 out of 2 in the Crimean Congo Hemorrhagic Fever Gn Zinc Finger


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crimean Congo Hemorrhagic Fever Gn Zinc Finger within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn106

b:20.0
occ:1.00
ND1 A:HIS52 2.1 20.0 1.0
SG A:CYS39 2.3 20.0 1.0
SG A:CYS36 2.3 20.0 1.0
SG A:CYS56 2.3 20.0 1.0
H A:CYS39 3.0 20.0 1.0
CE1 A:HIS52 3.0 20.0 1.0
HB3 A:CYS39 3.1 20.0 1.0
HE1 A:HIS52 3.1 20.0 1.0
CB A:CYS36 3.1 20.0 1.0
HB3 A:CYS36 3.1 20.0 1.0
CG A:HIS52 3.2 20.0 1.0
HB2 A:CYS36 3.2 20.0 1.0
HB3 A:HIS52 3.3 20.0 1.0
CB A:CYS39 3.3 20.0 1.0
CB A:CYS56 3.7 20.0 1.0
CB A:HIS52 3.7 20.0 1.0
N A:CYS39 3.7 20.0 1.0
HG12 A:VAL77 3.8 20.0 1.0
HB A:ILE38 3.8 20.0 1.0
HB2 A:CYS56 3.8 20.0 1.0
HB3 A:CYS56 4.0 20.0 1.0
HA A:HIS52 4.0 20.0 1.0
O A:HIS52 4.1 20.0 1.0
CA A:CYS39 4.1 20.0 1.0
H A:THR41 4.1 20.0 1.0
HG23 A:VAL77 4.1 20.0 1.0
HB A:THR41 4.1 20.0 1.0
HB2 A:CYS39 4.1 20.0 1.0
NE2 A:HIS52 4.2 20.0 1.0
HG3 A:PRO62 4.2 20.0 1.0
CA A:HIS52 4.3 20.0 1.0
CD2 A:HIS52 4.3 20.0 1.0
C A:HIS52 4.3 20.0 1.0
H A:ILE38 4.4 20.0 1.0
HD11 A:LEU73 4.5 20.0 1.0
H A:GLU40 4.5 20.0 1.0
CA A:CYS36 4.6 20.0 1.0
HB2 A:HIS52 4.6 20.0 1.0
O A:THR41 4.7 20.0 1.0
C A:CYS39 4.7 20.0 1.0
HB A:VAL77 4.7 20.0 1.0
CG1 A:VAL77 4.8 20.0 1.0
N A:GLU40 4.8 20.0 1.0
C A:ILE38 4.8 20.0 1.0
CB A:ILE38 4.9 20.0 1.0
HG13 A:ILE38 4.9 20.0 1.0
HA A:CYS36 4.9 20.0 1.0
N A:THR41 4.9 20.0 1.0
H A:CYS56 4.9 20.0 1.0
HD12 A:LEU73 4.9 20.0 1.0
HG2 A:PRO62 5.0 20.0 1.0
CA A:CYS56 5.0 20.0 1.0
HA A:CYS39 5.0 20.0 1.0
HG13 A:VAL77 5.0 20.0 1.0

Zinc binding site 2 out of 2 in 2l7x

Go back to Zinc Binding Sites List in 2l7x
Zinc binding site 2 out of 2 in the Crimean Congo Hemorrhagic Fever Gn Zinc Finger


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crimean Congo Hemorrhagic Fever Gn Zinc Finger within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn107

b:20.0
occ:1.00
NE2 A:HIS76 2.1 20.0 1.0
SG A:CYS61 2.3 20.0 1.0
SG A:CYS64 2.3 20.0 1.0
SG A:CYS80 2.3 20.0 1.0
HB2 A:CYS80 2.8 20.0 1.0
HB2 A:CYS61 2.8 20.0 1.0
CB A:CYS61 2.9 20.0 1.0
CE1 A:HIS76 3.0 20.0 1.0
HB3 A:CYS61 3.1 20.0 1.0
CB A:CYS80 3.1 20.0 1.0
HE1 A:HIS76 3.1 20.0 1.0
H A:CYS64 3.2 20.0 1.0
CD2 A:HIS76 3.2 20.0 1.0
HG A:SER66 3.3 20.0 1.0
HB3 A:CYS64 3.4 20.0 1.0
CB A:CYS64 3.5 20.0 1.0
HD2 A:HIS76 3.5 20.0 1.0
HB3 A:CYS80 3.7 20.0 1.0
HB2 A:TYR63 3.8 20.0 1.0
N A:CYS64 3.9 20.0 1.0
OG A:SER66 4.0 20.0 1.0
HB3 A:SER66 4.1 20.0 1.0
HB2 A:LYS82 4.1 20.0 1.0
HA A:CYS80 4.1 20.0 1.0
HD2 A:TYR63 4.1 20.0 1.0
ND1 A:HIS76 4.2 20.0 1.0
CA A:CYS64 4.2 20.0 1.0
H A:TYR63 4.3 20.0 1.0
CA A:CYS80 4.3 20.0 1.0
CG A:HIS76 4.3 20.0 1.0
HB2 A:CYS64 4.4 20.0 1.0
CA A:CYS61 4.4 20.0 1.0
HD2 A:PRO81 4.4 20.0 1.0
H A:SER66 4.4 20.0 1.0
CB A:SER66 4.6 20.0 1.0
HA A:CYS61 4.6 20.0 1.0
H A:ALA65 4.7 20.0 1.0
H A:LYS82 4.7 20.0 1.0
HD12 A:LEU68 4.8 20.0 1.0
HD2 A:PRO62 4.8 20.0 1.0
CB A:TYR63 4.8 20.0 1.0
C A:TYR63 4.8 20.0 1.0
C A:CYS64 4.9 20.0 1.0
HA A:VAL77 4.9 20.0 1.0
HD23 A:LEU68 4.9 20.0 1.0

Reference:

D.F.Estrada, R.N.De Guzman. Structural Characterization of the Crimean-Congo Hemorrhagic Fever Virus Gn Tail Provides Insight Into Virus Assembly. J.Biol.Chem. V. 286 21678 2011.
ISSN: ISSN 0021-9258
PubMed: 21507948
DOI: 10.1074/JBC.M110.216515
Page generated: Wed Dec 16 03:36:28 2020

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