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Zinc in PDB 2l1g: Rdc Refined Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its 16BP RRM1 Dna Target

Zinc Binding Sites:

The binding sites of Zinc atom in the Rdc Refined Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its 16BP RRM1 Dna Target (pdb code 2l1g). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Rdc Refined Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its 16BP RRM1 Dna Target, PDB code: 2l1g:

Zinc binding site 1 out of 1 in 2l1g

Go back to Zinc Binding Sites List in 2l1g
Zinc binding site 1 out of 1 in the Rdc Refined Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its 16BP RRM1 Dna Target


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Rdc Refined Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its 16BP RRM1 Dna Target within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn88

b:10.0
occ:1.00
OE2 A:GLU56 1.6 10.0 1.0
NE2 A:HIS57 2.1 10.0 1.0
SG A:CYS10 2.1 10.0 1.0
SG A:CYS54 2.2 10.0 1.0
SG A:CYS5 2.5 10.0 1.0
CD A:GLU56 2.8 10.0 1.0
CD2 A:HIS57 2.9 10.0 1.0
CE1 A:HIS57 3.0 10.0 1.0
HB2 A:ASN12 3.0 10.0 1.0
HD2 A:HIS57 3.1 10.0 1.0
HE1 A:HIS57 3.3 10.0 1.0
HG3 A:GLU56 3.4 10.0 1.0
HB2 A:CYS5 3.4 10.0 1.0
CB A:CYS10 3.5 10.0 1.0
CG A:GLU56 3.6 10.0 1.0
CB A:CYS5 3.6 10.0 1.0
H A:CYS54 3.7 10.0 1.0
HB3 A:CYS10 3.7 10.0 1.0
OE1 A:GLU56 3.8 10.0 1.0
HB2 A:CYS10 3.8 10.0 1.0
CB A:CYS54 3.8 10.0 1.0
HG2 A:GLU56 3.9 10.0 1.0
CB A:ASN12 3.9 10.0 1.0
HD21 A:ASN12 3.9 10.0 1.0
CG A:HIS57 3.9 10.0 1.0
ND1 A:HIS57 4.0 10.0 1.0
CG A:ASN12 4.0 10.0 1.0
ND2 A:ASN12 4.0 10.0 1.0
HB3 A:CYS5 4.1 10.0 1.0
HB3 A:CYS54 4.1 10.0 1.0
HB3 A:ASN12 4.3 10.0 1.0
H A:CYS5 4.4 10.0 1.0
N A:CYS54 4.4 10.0 1.0
O A:CYS54 4.4 10.0 1.0
O A:CYS10 4.5 10.0 1.0
HD22 A:ASN12 4.5 10.0 1.0
H A:ASN12 4.5 10.0 1.0
CA A:CYS54 4.5 10.0 1.0
HB2 A:CYS54 4.6 10.0 1.0
OD1 A:ASN12 4.6 10.0 1.0
HB1 A:ALA7 4.7 10.0 1.0
C A:CYS54 4.7 10.0 1.0
CA A:CYS10 4.8 10.0 1.0
HD1 A:HIS57 4.8 10.0 1.0
HG22 A:ILE53 4.9 10.0 1.0
CA A:CYS5 4.9 10.0 1.0
N A:CYS5 4.9 10.0 1.0
C A:CYS10 5.0 10.0 1.0
H A:GLU56 5.0 10.0 1.0
HB3 A:ALA7 5.0 10.0 1.0

Reference:

S.Campagne, V.Gervais, O.Saurel, A.Milon. Rdc Refined Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its 16BP RRM1 Dna Target To Be Published.
Page generated: Wed Dec 16 03:35:46 2020

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