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Zinc in PDB 2l0b: Solution uc(Nmr) Structure of Zinc Finger Domain of E3 Ubiquitin-Protein Ligase Praja-1 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR4710B

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution uc(Nmr) Structure of Zinc Finger Domain of E3 Ubiquitin-Protein Ligase Praja-1 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR4710B (pdb code 2l0b). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution uc(Nmr) Structure of Zinc Finger Domain of E3 Ubiquitin-Protein Ligase Praja-1 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR4710B, PDB code: 2l0b:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2l0b

Go back to Zinc Binding Sites List in 2l0b
Zinc binding site 1 out of 2 in the Solution uc(Nmr) Structure of Zinc Finger Domain of E3 Ubiquitin-Protein Ligase Praja-1 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR4710B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution uc(Nmr) Structure of Zinc Finger Domain of E3 Ubiquitin-Protein Ligase Praja-1 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR4710B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn143

b:24.6
occ:1.00
ND1 A:HIS66 2.1 3.3 1.0
SG A:CYS46 2.2 45.2 1.0
SG A:CYS69 2.4 71.3 1.0
SG A:CYS43 2.4 63.5 1.0
HB2 A:HIS66 2.5 37.5 1.0
CG A:HIS66 3.0 61.2 1.0
CE1 A:HIS66 3.1 40.1 1.0
CB A:HIS66 3.3 4.5 1.0
HB3 A:CYS69 3.4 37.5 1.0
HE1 A:HIS66 3.4 25.0 1.0
HB3 A:CYS43 3.4 37.5 1.0
CB A:CYS69 3.5 0.4 1.0
CB A:CYS43 3.5 41.5 1.0
HB2 A:CYS46 3.5 37.5 1.0
H A:HIS66 3.6 11.2 1.0
HB A:ILE45 3.6 33.1 1.0
CB A:CYS46 3.6 42.1 1.0
HB2 A:CYS43 3.8 37.5 1.0
HB2 A:CYS69 3.9 37.5 1.0
HB3 A:HIS66 3.9 37.5 1.0
CD2 A:HIS66 4.2 63.3 1.0
H A:CYS46 4.2 5.1 1.0
NE2 A:HIS66 4.2 63.3 1.0
HB3 A:CYS46 4.3 37.5 1.0
N A:HIS66 4.3 32.1 1.0
CA A:HIS66 4.4 63.5 1.0
N A:CYS46 4.4 24.2 1.0
H A:CYS69 4.5 74.1 1.0
HD11 A:ILE45 4.6 37.5 1.0
CA A:CYS46 4.6 23.1 1.0
CB A:ILE45 4.7 4.0 1.0
CA A:CYS69 4.9 43.2 1.0
CA A:CYS43 4.9 3.0 1.0
HG2 A:PRO68 5.0 37.5 1.0
HG21 A:ILE45 5.0 37.5 1.0
O A:HIS66 5.0 32.1 1.0

Zinc binding site 2 out of 2 in 2l0b

Go back to Zinc Binding Sites List in 2l0b
Zinc binding site 2 out of 2 in the Solution uc(Nmr) Structure of Zinc Finger Domain of E3 Ubiquitin-Protein Ligase Praja-1 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR4710B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution uc(Nmr) Structure of Zinc Finger Domain of E3 Ubiquitin-Protein Ligase Praja-1 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR4710B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn161

b:74.3
occ:1.00
ND1 A:HIS63 2.1 11.4 1.0
SG A:CYS61 2.3 2.5 1.0
SG A:CYS83 2.4 34.3 1.0
SG A:CYS80 2.4 52.3 1.0
HB2 A:HIS63 2.9 37.5 1.0
CE1 A:HIS63 3.1 24.2 1.0
HB3 A:CYS80 3.1 37.5 1.0
CG A:HIS63 3.1 5.1 1.0
HE1 A:HIS63 3.3 72.3 1.0
CB A:CYS80 3.3 44.2 1.0
HB3 A:CYS83 3.4 37.5 1.0
HB2 A:CYS61 3.5 37.5 1.0
CB A:HIS63 3.5 64.3 1.0
HB2 A:CYS80 3.5 37.5 1.0
CB A:CYS61 3.6 70.1 1.0
CB A:CYS83 3.6 64.3 1.0
HB3 A:HIS63 4.0 37.5 1.0
O A:CYS61 4.1 22.2 1.0
H A:CYS83 4.1 42.4 1.0
HB A:VAL82 4.1 24.1 1.0
HB3 A:CYS85 4.2 37.5 1.0
NE2 A:HIS63 4.2 3.5 1.0
HB3 A:CYS61 4.2 37.5 1.0
CD2 A:HIS63 4.3 64.4 1.0
HB2 A:CYS83 4.3 37.5 1.0
HD13 A:LEU59 4.4 37.5 1.0
N A:CYS83 4.5 41.3 1.0
C A:CYS61 4.5 54.3 1.0
HB2 A:LEU59 4.6 37.5 1.0
CA A:CYS83 4.7 25.3 1.0
CA A:CYS61 4.7 15.3 1.0
H A:CYS85 4.7 12.2 1.0
CA A:CYS80 4.7 44.4 1.0
HE2 A:PHE65 4.8 72.3 1.0
CA A:HIS63 4.8 0.4 1.0
N A:HIS63 4.9 23.5 1.0
H A:VAL82 4.9 0.0 1.0
HD12 A:LEU59 5.0 37.5 1.0
HB2 A:CYS85 5.0 37.5 1.0
O A:CYS80 5.0 12.4 1.0

Reference:

G.Liu, S.Tong, R.Xiao, T.B.Acton, J.K.Everett, G.T.Montelione. Solution Structure of Zinc Finger Domain of E3 Ubiquitin-Protein Ligase Protein Praja-1 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR4710B To Be Published.
Page generated: Wed Dec 16 03:35:42 2020

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