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Zinc in PDB 2j6x: The Crystal Structure of Lactate Oxidase

Enzymatic activity of The Crystal Structure of Lactate Oxidase

All present enzymatic activity of The Crystal Structure of Lactate Oxidase:
1.1.3.2;

Protein crystallography data

The structure of The Crystal Structure of Lactate Oxidase, PDB code: 2j6x was solved by I.Leiros, E.Wang, T.Rasmussen, E.Oksanen, H.Repo, S.B.Petersen, P.Heikinheimo, E.Hough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 12.00 / 2.1
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 117.340, 134.740, 185.560, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 25.7

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of Lactate Oxidase (pdb code 2j6x). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of Lactate Oxidase, PDB code: 2j6x:

Zinc binding site 1 out of 1 in 2j6x

Go back to Zinc Binding Sites List in 2j6x
Zinc binding site 1 out of 1 in the The Crystal Structure of Lactate Oxidase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Lactate Oxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn1376

b:26.6
occ:1.00
NE2 D:HIS233 2.0 20.9 1.0
OE2 D:GLU229 2.5 24.9 1.0
OE1 D:GLU229 2.6 22.5 1.0
CD D:GLU229 2.8 23.6 1.0
CD2 D:HIS233 2.9 21.2 1.0
CE1 D:HIS233 3.1 23.0 1.0
NH2 D:ARG225 4.1 32.8 1.0
CG D:HIS233 4.1 21.6 1.0
ND1 D:HIS233 4.1 21.6 1.0
CG D:GLU229 4.3 21.7 1.0
CA D:GLU229 4.7 20.5 1.0
CB D:GLU229 4.9 20.6 1.0

Reference:

I.Leiros, E.Wang, T.Rasmussen, E.Oksanen, H.Repo, S.B.Petersen, P.Heikinheimo, E.Hough. The 2.1 A Structure of Aerococcus Viridans L- Lactate Oxidase (Lox). Acta Crystallogr.,Sect.F V. 62 1185 2006.
ISSN: ISSN 1744-3091
PubMed: 17142893
DOI: 10.1107/S1744309106044678
Page generated: Wed Dec 16 03:31:42 2020

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