Zinc in PDB 2d8t: Solution Structure of the Ring Domain of the Human Ring Finger Protein 146

The binding sites of Zinc atom in the Solution Structure of the Ring Domain of the Human Ring Finger Protein 146 (pdb code 2d8t). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Ring Domain of the Human Ring Finger Protein 146, PDB code: 2d8t:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Ring Domain of the Human Ring Finger Protein 146


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Ring Domain of the Human Ring Finger Protein 146 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS41 2.3 0.0 1.0 SG A:CYS21 2.3 0.0 1.0 SG A:CYS38 2.3 0.0 1.0 SG A:CYS18 2.3 0.0 1.0 HB2 A:CYS38 2.9 0.0 1.0 H A:CYS21 3.2 0.0 1.0 CB A:CYS18 3.2 0.0 1.0 CB A:CYS38 3.2 0.0 1.0 HB3 A:CYS18 3.3 0.0 1.0 HB A:ILE20 3.3 0.0 1.0 HB2 A:CYS18 3.3 0.0 1.0 HB2 A:CYS41 3.3 0.0 1.0 H A:CYS38 3.4 0.0 1.0 HB3 A:CYS21 3.4 0.0 1.0 CB A:CYS41 3.5 0.0 1.0 CB A:CYS21 3.5 0.0 1.0 HB3 A:CYS41 3.8 0.0 1.0 N A:CYS21 3.9 0.0 1.0 HB3 A:CYS38 3.9 0.0 1.0 H A:ILE20 4.1 0.0 1.0 N A:CYS38 4.2 0.0 1.0 HD12 A:ILE20 4.2 0.0 1.0 CA A:CYS21 4.3 0.0 1.0 CB A:ILE20 4.3 0.0 1.0 CA A:CYS38 4.3 0.0 1.0 HB2 A:CYS21 4.3 0.0 1.0 HA A:CYS25 4.4 0.0 1.0 HG2 A:GLN23 4.4 0.0 1.0 H A:CYS41 4.6 0.0 1.0 CA A:CYS18 4.7 0.0 1.0 C A:ILE20 4.7 0.0 1.0 HG21 A:ILE20 4.8 0.0 1.0 H A:LEU22 4.8 0.0 1.0 CA A:CYS41 4.8 0.0 1.0 N A:ILE20 4.9 0.0 1.0 HB3 A:PHE37 4.9 0.0 1.0 CA A:ILE20 4.9 0.0 1.0 CG2 A:ILE20 5.0 0.0 1.0 HG23 A:ILE20 5.0 0.0 1.0 HA A:CYS38 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Ring Domain of the Human Ring Finger Protein 146


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Ring Domain of the Human Ring Finger Protein 146 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 ND1 A:HIS35 2.3 0.0 1.0 SG A:CYS55 2.3 0.0 1.0 SG A:CYS52 2.3 0.0 1.0 SG A:CYS33 2.3 0.0 1.0 H A:CYS55 2.7 0.0 1.0 HB2 A:CYS33 3.0 0.0 1.0 CE1 A:HIS35 3.1 0.0 1.0 HB2 A:HIS35 3.2 0.0 1.0 CB A:CYS33 3.2 0.0 1.0 HE1 A:HIS35 3.3 0.0 1.0 CB A:CYS52 3.3 0.0 1.0 HB3 A:CYS52 3.3 0.0 1.0 HB2 A:CYS52 3.3 0.0 1.0 HB2 A:LEU54 3.3 0.0 1.0 CG A:HIS35 3.4 0.0 1.0 HE2 A:PHE37 3.4 0.0 1.0 HB3 A:CYS55 3.4 0.0 1.0 CB A:CYS55 3.5 0.0 1.0 N A:CYS55 3.5 0.0 1.0 H A:GLN57 3.7 0.0 1.0 HZ A:PHE37 3.7 0.0 1.0 HB3 A:CYS33 3.7 0.0 1.0 HB3 A:GLN57 3.8 0.0 1.0 CB A:HIS35 3.8 0.0 1.0 H A:ARG56 3.9 0.0 1.0 H A:LEU54 4.0 0.0 1.0 HD12 A:LEU31 4.0 0.0 1.0 CA A:CYS55 4.0 0.0 1.0 HD11 A:LEU31 4.1 0.0 1.0 CE2 A:PHE37 4.2 0.0 1.0 HB3 A:HIS35 4.2 0.0 1.0 CB A:LEU54 4.2 0.0 1.0 NE2 A:HIS35 4.3 0.0 1.0 HB3 A:LEU54 4.3 0.0 1.0 CZ A:PHE37 4.3 0.0 1.0 HB2 A:GLN57 4.4 0.0 1.0 HB2 A:CYS55 4.4 0.0 1.0 N A:ARG56 4.4 0.0 1.0 HD11 A:LEU54 4.5 0.0 1.0 CD2 A:HIS35 4.5 0.0 1.0 CB A:GLN57 4.6 0.0 1.0 CA A:CYS33 4.6 0.0 1.0 CD1 A:LEU31 4.6 0.0 1.0 C A:LEU54 4.6 0.0 1.0 C A:CYS55 4.6 0.0 1.0 HB2 A:LEU31 4.6 0.0 1.0 O A:CYS33 4.6 0.0 1.0 N A:GLN57 4.6 0.0 1.0 HB3 A:LEU31 4.7 0.0 1.0 N A:LEU54 4.7 0.0 1.0 H A:ALA53 4.7 0.0 1.0 CA A:CYS52 4.7 0.0 1.0 CA A:LEU54 4.7 0.0 1.0 C A:CYS33 4.7 0.0 1.0 H A:CYS33 4.9 0.0 1.0 HA A:CYS55 5.0 0.0 1.0 HA A:CYS52 5.0 0.0 1.0

K.Miyamoto, T.Kigawa, M.Sato, S.Koshiba, M.Inoue, S.Yokoyama. Solution Structure of the Ring Domain of the Human Ring Finger Protein 146 To Be Published.