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Zinc in PDB 2d8s: Solution Structure of the Ring Domain of the Human Cellular Modulator of Immune Recognition Protein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Ring Domain of the Human Cellular Modulator of Immune Recognition Protein (pdb code 2d8s). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Ring Domain of the Human Cellular Modulator of Immune Recognition Protein, PDB code: 2d8s:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2d8s

Go back to Zinc Binding Sites List in 2d8s
Zinc binding site 1 out of 2 in the Solution Structure of the Ring Domain of the Human Cellular Modulator of Immune Recognition Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Ring Domain of the Human Cellular Modulator of Immune Recognition Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS48 2.3 0.0 1.0
SG A:CYS21 2.3 0.0 1.0
ND1 A:HIS45 2.3 0.0 1.0
SG A:CYS18 2.4 0.0 1.0
HB2 A:HIS45 2.6 0.0 1.0
CG A:HIS45 2.9 0.0 1.0
HB3 A:CYS21 3.0 0.0 1.0
HB2 A:CYS18 3.1 0.0 1.0
CE1 A:HIS45 3.1 0.0 1.0
CB A:CYS18 3.2 0.0 1.0
H A:CYS21 3.3 0.0 1.0
CB A:HIS45 3.3 0.0 1.0
CB A:CYS21 3.3 0.0 1.0
HB2 A:CYS48 3.4 0.0 1.0
HB3 A:CYS18 3.5 0.0 1.0
CB A:CYS48 3.5 0.0 1.0
H A:HIS45 3.5 0.0 1.0
HE1 A:HIS45 3.5 0.0 1.0
HB3 A:CYS48 3.8 0.0 1.0
CD2 A:HIS45 3.9 0.0 1.0
NE2 A:HIS45 4.0 0.0 1.0
HB3 A:HIS45 4.0 0.0 1.0
N A:CYS21 4.0 0.0 1.0
HB A:ILE20 4.0 0.0 1.0
HB2 A:CYS21 4.1 0.0 1.0
HB2 A:CYS23 4.2 0.0 1.0
N A:HIS45 4.2 0.0 1.0
CA A:CYS21 4.2 0.0 1.0
H A:HIS22 4.3 0.0 1.0
H A:CYS23 4.4 0.0 1.0
CA A:HIS45 4.4 0.0 1.0
H A:CYS48 4.6 0.0 1.0
H A:ILE20 4.6 0.0 1.0
CA A:CYS18 4.7 0.0 1.0
HE2 A:HIS45 4.8 0.0 1.0
HD2 A:HIS45 4.8 0.0 1.0
CA A:CYS48 4.8 0.0 1.0
N A:HIS22 4.8 0.0 1.0
HA A:CYS18 4.9 0.0 1.0
HG A:SER29 4.9 0.0 1.0
C A:CYS21 4.9 0.0 1.0
HD13 A:ILE20 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2d8s

Go back to Zinc Binding Sites List in 2d8s
Zinc binding site 2 out of 2 in the Solution Structure of the Ring Domain of the Human Cellular Modulator of Immune Recognition Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Ring Domain of the Human Cellular Modulator of Immune Recognition Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS35 2.3 0.0 1.0
SG A:CYS37 2.3 0.0 1.0
SG A:CYS64 2.3 0.0 1.0
SG A:CYS61 2.4 0.0 1.0
HB2 A:CYS37 3.0 0.0 1.0
HB2 A:CYS61 3.1 0.0 1.0
HD2 A:HIS36 3.1 0.0 1.0
H A:CYS37 3.2 0.0 1.0
HB2 A:CYS35 3.2 0.0 1.0
CB A:CYS61 3.2 0.0 1.0
CB A:CYS37 3.3 0.0 1.0
HB3 A:CYS64 3.3 0.0 1.0
CB A:CYS35 3.4 0.0 1.0
H A:CYS64 3.5 0.0 1.0
CB A:CYS64 3.5 0.0 1.0
HB3 A:CYS61 3.5 0.0 1.0
HB3 A:CYS35 3.8 0.0 1.0
CD2 A:HIS36 3.8 0.0 1.0
NE2 A:HIS42 3.9 0.0 1.0
HE1 A:HIS42 3.9 0.0 1.0
N A:CYS37 4.0 0.0 1.0
CE1 A:HIS42 4.1 0.0 1.0
HB3 A:CYS37 4.1 0.0 1.0
HB3 A:TYR66 4.2 0.0 1.0
NE2 A:HIS36 4.2 0.0 1.0
HE1 A:PHE68 4.2 0.0 1.0
CA A:CYS37 4.3 0.0 1.0
HB2 A:CYS64 4.3 0.0 1.0
N A:CYS64 4.3 0.0 1.0
H A:HIS36 4.3 0.0 1.0
H A:TYR66 4.5 0.0 1.0
CA A:CYS64 4.5 0.0 1.0
HB2 A:LEU63 4.5 0.0 1.0
H A:LEU63 4.6 0.0 1.0
N A:HIS36 4.7 0.0 1.0
CA A:CYS61 4.7 0.0 1.0
CA A:CYS35 4.7 0.0 1.0
HA A:CYS37 4.8 0.0 1.0
HD11 A:LEU63 4.8 0.0 1.0
CD2 A:HIS42 4.8 0.0 1.0
HA A:CYS61 4.8 0.0 1.0
H A:LYS65 4.8 0.0 1.0
H A:GLU62 4.9 0.0 1.0
C A:CYS35 4.9 0.0 1.0
CG A:HIS36 4.9 0.0 1.0

Reference:

K.Miyamoto, T.Kigawa, T.Tomizawa, S.Koshiba, M.Inoue, S.Yokoyama. Solution Structure of the Ring Domain of the Human Cellular Modulator of Immune Recognition Protein To Be Published.
Page generated: Wed Dec 16 03:20:43 2020

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