Zinc in PDB 2ct7: Solution Structure of the Ibr Domain of the Ring Finger Protein 31 Protein
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the Ibr Domain of the Ring Finger Protein 31 Protein
(pdb code 2ct7). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the Ibr Domain of the Ring Finger Protein 31 Protein, PDB code: 2ct7:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2ct7
Go back to
Zinc Binding Sites List in 2ct7
Zinc binding site 1 out
of 2 in the Solution Structure of the Ibr Domain of the Ring Finger Protein 31 Protein
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the Ibr Domain of the Ring Finger Protein 31 Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
SG
|
A:CYS49
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS28
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS46
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS31
|
2.4
|
0.0
|
1.0
|
H
|
A:CYS49
|
3.0
|
0.0
|
1.0
|
HB2
|
A:CYS28
|
3.1
|
0.0
|
1.0
|
HB2
|
A:CYS49
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS31
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS46
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS46
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS28
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS49
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS46
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS31
|
3.5
|
0.0
|
1.0
|
HB2
|
A:PHE33
|
3.5
|
0.0
|
1.0
|
HB3
|
A:GLN48
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS28
|
3.7
|
0.0
|
1.0
|
HG2
|
A:GLN48
|
3.8
|
0.0
|
1.0
|
N
|
A:CYS49
|
3.9
|
0.0
|
1.0
|
HB2
|
A:CYS31
|
4.0
|
0.0
|
1.0
|
HD2
|
A:PHE33
|
4.0
|
0.0
|
1.0
|
H
|
A:PHE33
|
4.1
|
0.0
|
1.0
|
HB3
|
A:CYS49
|
4.2
|
0.0
|
1.0
|
H
|
A:CYS31
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS49
|
4.3
|
0.0
|
1.0
|
H
|
A:GLN48
|
4.4
|
0.0
|
1.0
|
H
|
A:CYS28
|
4.5
|
0.0
|
1.0
|
HE21
|
A:GLN48
|
4.5
|
0.0
|
1.0
|
CB
|
A:GLN48
|
4.5
|
0.0
|
1.0
|
CB
|
A:PHE33
|
4.6
|
0.0
|
1.0
|
H
|
A:SER32
|
4.6
|
0.0
|
1.0
|
CG
|
A:GLN48
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS28
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS31
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS46
|
4.8
|
0.0
|
1.0
|
H
|
A:HIS50
|
4.8
|
0.0
|
1.0
|
HD2
|
A:PRO47
|
4.9
|
0.0
|
1.0
|
N
|
A:CYS31
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS49
|
4.9
|
0.0
|
1.0
|
N
|
A:PHE33
|
4.9
|
0.0
|
1.0
|
C
|
A:GLN48
|
4.9
|
0.0
|
1.0
|
HE2
|
A:PHE35
|
4.9
|
0.0
|
1.0
|
HB3
|
A:PHE33
|
5.0
|
0.0
|
1.0
|
N
|
A:CYS28
|
5.0
|
0.0
|
1.0
|
CD2
|
A:PHE33
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2ct7
Go back to
Zinc Binding Sites List in 2ct7
Zinc binding site 2 out
of 2 in the Solution Structure of the Ibr Domain of the Ring Finger Protein 31 Protein
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the Ibr Domain of the Ring Finger Protein 31 Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
SG
|
A:CYS70
|
2.3
|
0.0
|
1.0
|
NE2
|
A:HIS65
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS57
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS54
|
2.4
|
0.0
|
1.0
|
H
|
A:CYS57
|
2.8
|
0.0
|
1.0
|
CE1
|
A:HIS65
|
3.1
|
0.0
|
1.0
|
HB2
|
A:ARG56
|
3.2
|
0.0
|
1.0
|
HA
|
A:CYS70
|
3.2
|
0.0
|
1.0
|
HE1
|
A:HIS65
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS54
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS54
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS54
|
3.3
|
0.0
|
1.0
|
CD2
|
A:HIS65
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS57
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS70
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS57
|
3.5
|
0.0
|
1.0
|
HZ3
|
A:TRP61
|
3.6
|
0.0
|
1.0
|
HD2
|
A:HIS65
|
3.7
|
0.0
|
1.0
|
HB3
|
A:CYS70
|
3.7
|
0.0
|
1.0
|
CA
|
A:CYS70
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS57
|
3.7
|
0.0
|
1.0
|
HD23
|
A:LEU42
|
3.9
|
0.0
|
1.0
|
H
|
A:CYS70
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS70
|
4.0
|
0.0
|
1.0
|
H
|
A:ARG56
|
4.2
|
0.0
|
1.0
|
ND1
|
A:HIS65
|
4.2
|
0.0
|
1.0
|
CB
|
A:ARG56
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS57
|
4.2
|
0.0
|
1.0
|
HG2
|
A:ARG59
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS57
|
4.4
|
0.0
|
1.0
|
CG
|
A:HIS65
|
4.4
|
0.0
|
1.0
|
HB2
|
A:CYS70
|
4.4
|
0.0
|
1.0
|
HD2
|
A:ARG56
|
4.4
|
0.0
|
1.0
|
HB3
|
A:ARG56
|
4.5
|
0.0
|
1.0
|
CZ3
|
A:TRP61
|
4.6
|
0.0
|
1.0
|
HE3
|
A:TRP61
|
4.6
|
0.0
|
1.0
|
H
|
A:LYS58
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS54
|
4.7
|
0.0
|
1.0
|
C
|
A:ARG56
|
4.8
|
0.0
|
1.0
|
CD2
|
A:LEU42
|
4.8
|
0.0
|
1.0
|
C
|
A:SER69
|
4.9
|
0.0
|
1.0
|
CA
|
A:ARG56
|
4.9
|
0.0
|
1.0
|
H
|
A:ARG59
|
4.9
|
0.0
|
1.0
|
N
|
A:ARG56
|
4.9
|
0.0
|
1.0
|
HD22
|
A:LEU42
|
5.0
|
0.0
|
1.0
|
HE
|
A:ARG59
|
5.0
|
0.0
|
1.0
|
|
Reference:
K.Miyamoto,
S.Koshiba,
T.Tomizawa,
M.Inoue,
T.Kigawa,
S.Yokoyama.
Solution Structure of the Ibr Domain of the Ring Finger Protein 31 Protein To Be Published.
Page generated: Wed Oct 16 22:32:09 2024
|