Zinc in PDB 2ct0: Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein
(pdb code 2ct0). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein, PDB code: 2ct0:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2ct0
Go back to
Zinc Binding Sites List in 2ct0
Zinc binding site 1 out
of 2 in the Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
SG
|
A:CYS42
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS21
|
2.3
|
0.0
|
1.0
|
ND1
|
A:HIS39
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS18
|
2.4
|
0.0
|
1.0
|
HB2
|
A:HIS39
|
2.6
|
0.0
|
1.0
|
H
|
A:CYS21
|
2.9
|
0.0
|
1.0
|
H
|
A:HIS39
|
3.2
|
0.0
|
1.0
|
CG
|
A:HIS39
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS18
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS18
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS21
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS18
|
3.3
|
0.0
|
1.0
|
HB
|
A:ILE20
|
3.3
|
0.0
|
1.0
|
CE1
|
A:HIS39
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS42
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS42
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS21
|
3.4
|
0.0
|
1.0
|
CB
|
A:HIS39
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS42
|
3.5
|
0.0
|
1.0
|
HE1
|
A:HIS39
|
3.6
|
0.0
|
1.0
|
N
|
A:CYS21
|
3.6
|
0.0
|
1.0
|
N
|
A:HIS39
|
4.0
|
0.0
|
1.0
|
H
|
A:ILE20
|
4.0
|
0.0
|
1.0
|
CA
|
A:CYS21
|
4.1
|
0.0
|
1.0
|
HB3
|
A:HIS39
|
4.2
|
0.0
|
1.0
|
H
|
A:HIS22
|
4.2
|
0.0
|
1.0
|
H
|
A:SER23
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS21
|
4.3
|
0.0
|
1.0
|
HB2
|
A:SER23
|
4.3
|
0.0
|
1.0
|
CA
|
A:HIS39
|
4.3
|
0.0
|
1.0
|
CB
|
A:ILE20
|
4.3
|
0.0
|
1.0
|
CD2
|
A:HIS39
|
4.4
|
0.0
|
1.0
|
NE2
|
A:HIS39
|
4.4
|
0.0
|
1.0
|
HA
|
A:MET38
|
4.6
|
0.0
|
1.0
|
C
|
A:ILE20
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS18
|
4.7
|
0.0
|
1.0
|
N
|
A:HIS22
|
4.7
|
0.0
|
1.0
|
N
|
A:ILE20
|
4.7
|
0.0
|
1.0
|
H
|
A:ASN19
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS42
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS21
|
4.8
|
0.0
|
1.0
|
HG22
|
A:ILE20
|
4.8
|
0.0
|
1.0
|
CA
|
A:ILE20
|
4.8
|
0.0
|
1.0
|
HD23
|
A:LEU25
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS18
|
5.0
|
0.0
|
1.0
|
HA
|
A:CYS21
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2ct0
Go back to
Zinc Binding Sites List in 2ct0
Zinc binding site 2 out
of 2 in the Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
SG
|
A:CYS58
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS34
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS31
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS55
|
2.4
|
0.0
|
1.0
|
HB
|
A:THR33
|
2.8
|
0.0
|
1.0
|
H
|
A:CYS58
|
2.8
|
0.0
|
1.0
|
H
|
A:CYS34
|
2.9
|
0.0
|
1.0
|
HB3
|
A:HIS57
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS31
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS55
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS31
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS55
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS55
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS58
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS34
|
3.5
|
0.0
|
1.0
|
HB2
|
A:CYS31
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS58
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS34
|
3.5
|
0.0
|
1.0
|
N
|
A:CYS34
|
3.6
|
0.0
|
1.0
|
H
|
A:GLY35
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS58
|
3.7
|
0.0
|
1.0
|
HG12
|
A:ILE36
|
3.9
|
0.0
|
1.0
|
CB
|
A:THR33
|
3.9
|
0.0
|
1.0
|
HG13
|
A:ILE36
|
3.9
|
0.0
|
1.0
|
HG22
|
A:THR33
|
4.0
|
0.0
|
1.0
|
CB
|
A:HIS57
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS34
|
4.1
|
0.0
|
1.0
|
HZ3
|
A:TRP62
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS58
|
4.2
|
0.0
|
1.0
|
H
|
A:THR33
|
4.3
|
0.0
|
1.0
|
HG1
|
A:THR33
|
4.3
|
0.0
|
1.0
|
H
|
A:HIS57
|
4.3
|
0.0
|
1.0
|
H
|
A:ASN59
|
4.3
|
0.0
|
1.0
|
HD2
|
A:HIS57
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS58
|
4.4
|
0.0
|
1.0
|
HG21
|
A:ILE36
|
4.4
|
0.0
|
1.0
|
HB2
|
A:CYS34
|
4.4
|
0.0
|
1.0
|
CG1
|
A:ILE36
|
4.4
|
0.0
|
1.0
|
CG2
|
A:THR33
|
4.5
|
0.0
|
1.0
|
C
|
A:THR33
|
4.5
|
0.0
|
1.0
|
HB2
|
A:HIS57
|
4.5
|
0.0
|
1.0
|
N
|
A:GLY35
|
4.6
|
0.0
|
1.0
|
CA
|
A:THR33
|
4.6
|
0.0
|
1.0
|
OG1
|
A:THR33
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS31
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS55
|
4.7
|
0.0
|
1.0
|
N
|
A:THR33
|
4.7
|
0.0
|
1.0
|
C
|
A:HIS57
|
4.8
|
0.0
|
1.0
|
HG23
|
A:THR33
|
4.8
|
0.0
|
1.0
|
H
|
A:ILE36
|
4.8
|
0.0
|
1.0
|
CA
|
A:HIS57
|
4.9
|
0.0
|
1.0
|
CG
|
A:HIS57
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS34
|
4.9
|
0.0
|
1.0
|
CD2
|
A:HIS57
|
4.9
|
0.0
|
1.0
|
N
|
A:HIS57
|
5.0
|
0.0
|
1.0
|
|
Reference:
K.Miyamoto,
M.Sato,
S.Koshiba,
M.Inoue,
T.Kigawa,
S.Yokoyama.
Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein To Be Published.
Page generated: Wed Oct 16 22:31:13 2024
|