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Zinc in PDB 2ct0: Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein (pdb code 2ct0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein, PDB code: 2ct0:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2ct0

Go back to Zinc Binding Sites List in 2ct0
Zinc binding site 1 out of 2 in the Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS42 2.3 0.0 1.0
SG A:CYS21 2.3 0.0 1.0
ND1 A:HIS39 2.3 0.0 1.0
SG A:CYS18 2.4 0.0 1.0
HB2 A:HIS39 2.6 0.0 1.0
H A:CYS21 2.9 0.0 1.0
H A:HIS39 3.2 0.0 1.0
CG A:HIS39 3.2 0.0 1.0
CB A:CYS18 3.2 0.0 1.0
HB2 A:CYS18 3.2 0.0 1.0
HB3 A:CYS21 3.3 0.0 1.0
HB3 A:CYS18 3.3 0.0 1.0
HB A:ILE20 3.3 0.0 1.0
CE1 A:HIS39 3.3 0.0 1.0
HB2 A:CYS42 3.3 0.0 1.0
CB A:CYS42 3.4 0.0 1.0
CB A:CYS21 3.4 0.0 1.0
CB A:HIS39 3.4 0.0 1.0
HB3 A:CYS42 3.5 0.0 1.0
HE1 A:HIS39 3.6 0.0 1.0
N A:CYS21 3.6 0.0 1.0
N A:HIS39 4.0 0.0 1.0
H A:ILE20 4.0 0.0 1.0
CA A:CYS21 4.1 0.0 1.0
HB3 A:HIS39 4.2 0.0 1.0
H A:HIS22 4.2 0.0 1.0
H A:SER23 4.3 0.0 1.0
HB2 A:CYS21 4.3 0.0 1.0
HB2 A:SER23 4.3 0.0 1.0
CA A:HIS39 4.3 0.0 1.0
CB A:ILE20 4.3 0.0 1.0
CD2 A:HIS39 4.4 0.0 1.0
NE2 A:HIS39 4.4 0.0 1.0
HA A:MET38 4.6 0.0 1.0
C A:ILE20 4.6 0.0 1.0
CA A:CYS18 4.7 0.0 1.0
N A:HIS22 4.7 0.0 1.0
N A:ILE20 4.7 0.0 1.0
H A:ASN19 4.8 0.0 1.0
CA A:CYS42 4.8 0.0 1.0
C A:CYS21 4.8 0.0 1.0
HG22 A:ILE20 4.8 0.0 1.0
CA A:ILE20 4.8 0.0 1.0
HD23 A:LEU25 4.9 0.0 1.0
HA A:CYS18 5.0 0.0 1.0
HA A:CYS21 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2ct0

Go back to Zinc Binding Sites List in 2ct0
Zinc binding site 2 out of 2 in the Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS58 2.3 0.0 1.0
SG A:CYS34 2.3 0.0 1.0
SG A:CYS31 2.4 0.0 1.0
SG A:CYS55 2.4 0.0 1.0
HB A:THR33 2.8 0.0 1.0
H A:CYS58 2.8 0.0 1.0
H A:CYS34 2.9 0.0 1.0
HB3 A:HIS57 3.1 0.0 1.0
HB3 A:CYS31 3.1 0.0 1.0
HB3 A:CYS55 3.2 0.0 1.0
CB A:CYS31 3.2 0.0 1.0
CB A:CYS55 3.2 0.0 1.0
HB2 A:CYS55 3.3 0.0 1.0
HB3 A:CYS58 3.4 0.0 1.0
HB3 A:CYS34 3.5 0.0 1.0
HB2 A:CYS31 3.5 0.0 1.0
CB A:CYS58 3.5 0.0 1.0
CB A:CYS34 3.5 0.0 1.0
N A:CYS34 3.6 0.0 1.0
H A:GLY35 3.7 0.0 1.0
N A:CYS58 3.7 0.0 1.0
HG12 A:ILE36 3.9 0.0 1.0
CB A:THR33 3.9 0.0 1.0
HG13 A:ILE36 3.9 0.0 1.0
HG22 A:THR33 4.0 0.0 1.0
CB A:HIS57 4.1 0.0 1.0
CA A:CYS34 4.1 0.0 1.0
HZ3 A:TRP62 4.2 0.0 1.0
CA A:CYS58 4.2 0.0 1.0
H A:THR33 4.3 0.0 1.0
HG1 A:THR33 4.3 0.0 1.0
H A:HIS57 4.3 0.0 1.0
H A:ASN59 4.3 0.0 1.0
HD2 A:HIS57 4.3 0.0 1.0
HB2 A:CYS58 4.4 0.0 1.0
HG21 A:ILE36 4.4 0.0 1.0
HB2 A:CYS34 4.4 0.0 1.0
CG1 A:ILE36 4.4 0.0 1.0
CG2 A:THR33 4.5 0.0 1.0
C A:THR33 4.5 0.0 1.0
HB2 A:HIS57 4.5 0.0 1.0
N A:GLY35 4.6 0.0 1.0
CA A:THR33 4.6 0.0 1.0
OG1 A:THR33 4.7 0.0 1.0
CA A:CYS31 4.7 0.0 1.0
CA A:CYS55 4.7 0.0 1.0
N A:THR33 4.7 0.0 1.0
C A:HIS57 4.8 0.0 1.0
HG23 A:THR33 4.8 0.0 1.0
H A:ILE36 4.8 0.0 1.0
CA A:HIS57 4.9 0.0 1.0
CG A:HIS57 4.9 0.0 1.0
C A:CYS34 4.9 0.0 1.0
CD2 A:HIS57 4.9 0.0 1.0
N A:HIS57 5.0 0.0 1.0

Reference:

K.Miyamoto, M.Sato, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama. Solution Structure of the Ring Domain of the Non-Smc Element 1 Protein To Be Published.
Page generated: Wed Oct 16 22:31:13 2024

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