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Zinc in PDB 2csy: Solution Structure of the Ring Domain of the Zinc Finger Protein 183-Like 1

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Ring Domain of the Zinc Finger Protein 183-Like 1 (pdb code 2csy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Ring Domain of the Zinc Finger Protein 183-Like 1, PDB code: 2csy:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2csy

Go back to Zinc Binding Sites List in 2csy
Zinc binding site 1 out of 2 in the Solution Structure of the Ring Domain of the Zinc Finger Protein 183-Like 1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Ring Domain of the Zinc Finger Protein 183-Like 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS41 2.3 0.0 1.0
SG A:CYS21 2.3 0.0 1.0
SG A:CYS18 2.3 0.0 1.0
SG A:CYS38 2.4 0.0 1.0
HB2 A:CYS38 2.9 0.0 1.0
HB A:ILE20 3.2 0.0 1.0
CB A:CYS38 3.2 0.0 1.0
CB A:CYS18 3.2 0.0 1.0
H A:CYS21 3.3 0.0 1.0
HB2 A:CYS18 3.3 0.0 1.0
HB3 A:CYS18 3.3 0.0 1.0
HB2 A:CYS41 3.4 0.0 1.0
HB3 A:CYS21 3.4 0.0 1.0
H A:CYS38 3.5 0.0 1.0
CB A:CYS21 3.5 0.0 1.0
CB A:CYS41 3.5 0.0 1.0
N A:CYS21 3.8 0.0 1.0
HB3 A:CYS38 3.9 0.0 1.0
HB3 A:CYS41 4.0 0.0 1.0
CB A:ILE20 4.2 0.0 1.0
H A:ILE20 4.3 0.0 1.0
N A:CYS38 4.3 0.0 1.0
CA A:CYS21 4.3 0.0 1.0
HB2 A:CYS21 4.4 0.0 1.0
CA A:CYS38 4.4 0.0 1.0
H A:CYS41 4.5 0.0 1.0
HD12 A:ILE20 4.5 0.0 1.0
C A:ILE20 4.6 0.0 1.0
H A:GLN23 4.6 0.0 1.0
H A:ARG22 4.6 0.0 1.0
CA A:CYS18 4.7 0.0 1.0
N A:ILE20 4.7 0.0 1.0
HG21 A:ILE20 4.7 0.0 1.0
HG23 A:ILE20 4.7 0.0 1.0
CA A:ILE20 4.8 0.0 1.0
CA A:CYS41 4.8 0.0 1.0
H A:PHE19 4.8 0.0 1.0
CG2 A:ILE20 4.9 0.0 1.0
HG2 A:GLN23 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 2csy

Go back to Zinc Binding Sites List in 2csy
Zinc binding site 2 out of 2 in the Solution Structure of the Ring Domain of the Zinc Finger Protein 183-Like 1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Ring Domain of the Zinc Finger Protein 183-Like 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS52 2.3 0.0 1.0
ND1 A:HIS35 2.3 0.0 1.0
SG A:CYS55 2.3 0.0 1.0
SG A:CYS33 2.4 0.0 1.0
HZ A:PHE37 2.6 0.0 1.0
HB2 A:HIS35 2.9 0.0 1.0
HB2 A:CYS33 3.0 0.0 1.0
H A:CYS55 3.0 0.0 1.0
HB2 A:CYS52 3.2 0.0 1.0
CG A:HIS35 3.2 0.0 1.0
CE1 A:HIS35 3.2 0.0 1.0
CB A:CYS33 3.2 0.0 1.0
CB A:CYS52 3.2 0.0 1.0
HB3 A:CYS52 3.4 0.0 1.0
HB3 A:CYS55 3.4 0.0 1.0
HE1 A:HIS35 3.5 0.0 1.0
CB A:CYS55 3.5 0.0 1.0
CB A:HIS35 3.5 0.0 1.0
HB3 A:CYS33 3.6 0.0 1.0
HB A:ILE54 3.6 0.0 1.0
CZ A:PHE37 3.7 0.0 1.0
HB3 A:HIS35 3.8 0.0 1.0
N A:CYS55 3.8 0.0 1.0
H A:ILE54 4.1 0.0 1.0
HE2 A:PHE37 4.1 0.0 1.0
CA A:CYS55 4.3 0.0 1.0
NE2 A:HIS35 4.3 0.0 1.0
CD2 A:HIS35 4.3 0.0 1.0
HB2 A:CYS55 4.4 0.0 1.0
CE2 A:PHE37 4.4 0.0 1.0
HB2 A:GLN57 4.5 0.0 1.0
OG1 A:THR31 4.5 0.0 1.0
HG1 A:THR31 4.5 0.0 1.0
H A:ASP56 4.5 0.0 1.0
H A:GLN57 4.6 0.0 1.0
CA A:CYS33 4.6 0.0 1.0
HE1 A:PHE37 4.6 0.0 1.0
CB A:ILE54 4.7 0.0 1.0
O A:CYS33 4.7 0.0 1.0
CE1 A:PHE37 4.7 0.0 1.0
CA A:CYS52 4.7 0.0 1.0
H A:TYR53 4.7 0.0 1.0
HG23 A:ILE54 4.8 0.0 1.0
C A:CYS33 4.9 0.0 1.0
N A:ILE54 4.9 0.0 1.0
C A:ILE54 4.9 0.0 1.0
H A:CYS33 4.9 0.0 1.0
HA A:CYS52 4.9 0.0 1.0
CA A:HIS35 4.9 0.0 1.0
C A:CYS55 5.0 0.0 1.0
N A:ASP56 5.0 0.0 1.0

Reference:

K.Miyamoto, M.Sato, T.Tomizawa, K.Saito, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama. Solution Structure of the Ring Domain of the Zinc Finger Protein 183-Like 1 To Be Published.
Page generated: Wed Oct 16 22:30:48 2024

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