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Zinc in PDB 2cor: Solution Structure of the Third Lim Domain of Particularly Interesting New Cys-His Protein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Third Lim Domain of Particularly Interesting New Cys-His Protein (pdb code 2cor). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Third Lim Domain of Particularly Interesting New Cys-His Protein, PDB code: 2cor:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2cor

Go back to Zinc Binding Sites List in 2cor
Zinc binding site 1 out of 2 in the Solution Structure of the Third Lim Domain of Particularly Interesting New Cys-His Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Third Lim Domain of Particularly Interesting New Cys-His Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
NE2 A:HIS41 2.1 0.0 1.0
ND1 A:HIS38 2.1 0.0 1.0
SG A:CYS18 2.3 0.0 1.0
SG A:CYS21 2.4 0.0 1.0
CD2 A:HIS41 2.6 0.0 1.0
HD2 A:HIS41 2.6 0.0 1.0
HB2 A:HIS38 2.7 0.0 1.0
H A:CYS21 3.0 0.0 1.0
CE1 A:HIS38 3.0 0.0 1.0
CG A:HIS38 3.0 0.0 1.0
HB3 A:CYS21 3.1 0.0 1.0
HB3 A:CYS18 3.1 0.0 1.0
HB3 A:LYS20 3.1 0.0 1.0
CE1 A:HIS41 3.2 0.0 1.0
CB A:CYS18 3.2 0.0 1.0
HE1 A:HIS38 3.3 0.0 1.0
CB A:CYS21 3.3 0.0 1.0
HB2 A:CYS18 3.3 0.0 1.0
CB A:HIS38 3.4 0.0 1.0
H A:HIS38 3.5 0.0 1.0
N A:CYS21 3.7 0.0 1.0
HE1 A:HIS41 3.7 0.0 1.0
CG A:HIS41 3.8 0.0 1.0
ND1 A:HIS41 4.1 0.0 1.0
NE2 A:HIS38 4.1 0.0 1.0
CA A:CYS21 4.1 0.0 1.0
HB3 A:HIS38 4.1 0.0 1.0
CD2 A:HIS38 4.1 0.0 1.0
N A:HIS38 4.1 0.0 1.0
CB A:LYS20 4.2 0.0 1.0
HB2 A:CYS21 4.2 0.0 1.0
HG2 A:LYS20 4.2 0.0 1.0
H A:LYS20 4.3 0.0 1.0
HB1 A:ALA23 4.4 0.0 1.0
CA A:HIS38 4.4 0.0 1.0
H A:ALA23 4.6 0.0 1.0
C A:LYS20 4.6 0.0 1.0
H A:HIS22 4.6 0.0 1.0
CA A:CYS18 4.7 0.0 1.0
CG A:LYS20 4.7 0.0 1.0
HA A:TYR37 4.7 0.0 1.0
HG3 A:LYS20 4.8 0.0 1.0
CA A:LYS20 4.8 0.0 1.0
HB2 A:LYS20 4.8 0.0 1.0
C A:CYS21 4.8 0.0 1.0
HE2 A:HIS38 4.9 0.0 1.0
N A:LYS20 4.9 0.0 1.0
HA A:CYS21 5.0 0.0 1.0
HA A:HIS38 5.0 0.0 1.0
HD1 A:HIS41 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2cor

Go back to Zinc Binding Sites List in 2cor
Zinc binding site 2 out of 2 in the Solution Structure of the Third Lim Domain of Particularly Interesting New Cys-His Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Third Lim Domain of Particularly Interesting New Cys-His Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS47 2.3 0.0 1.0
SG A:CYS64 2.3 0.0 1.0
SG A:CYS67 2.4 0.0 1.0
SG A:CYS44 2.4 0.0 1.0
HB2 A:CYS67 2.6 0.0 1.0
CB A:CYS67 3.0 0.0 1.0
HB2 A:CYS44 3.0 0.0 1.0
H A:CYS47 3.1 0.0 1.0
H A:CYS64 3.1 0.0 1.0
CB A:CYS44 3.1 0.0 1.0
HB3 A:CYS44 3.3 0.0 1.0
HG2 A:LYS49 3.4 0.0 1.0
H A:CYS67 3.4 0.0 1.0
HB3 A:ASN46 3.6 0.0 1.0
CB A:CYS64 3.7 0.0 1.0
HB3 A:CYS64 3.7 0.0 1.0
CB A:CYS47 3.7 0.0 1.0
HB3 A:CYS47 3.7 0.0 1.0
HB3 A:CYS67 3.8 0.0 1.0
HD3 A:LYS49 3.9 0.0 1.0
H A:GLY48 3.9 0.0 1.0
N A:CYS64 4.0 0.0 1.0
N A:CYS47 4.0 0.0 1.0
HB2 A:PRO66 4.0 0.0 1.0
N A:CYS67 4.1 0.0 1.0
HD21 A:ASN46 4.1 0.0 1.0
CA A:CYS67 4.1 0.0 1.0
H A:LYS49 4.3 0.0 1.0
CA A:CYS64 4.4 0.0 1.0
H A:ASN46 4.4 0.0 1.0
CG A:LYS49 4.4 0.0 1.0
CA A:CYS47 4.5 0.0 1.0
HB3 A:TYR63 4.5 0.0 1.0
O A:CYS64 4.5 0.0 1.0
HB2 A:CYS47 4.5 0.0 1.0
HB2 A:CYS64 4.5 0.0 1.0
CD A:LYS49 4.5 0.0 1.0
HA A:CYS67 4.6 0.0 1.0
CA A:CYS44 4.6 0.0 1.0
HD2 A:LYS49 4.6 0.0 1.0
CB A:ASN46 4.6 0.0 1.0
HD23 A:LEU51 4.7 0.0 1.0
HD2 A:TYR63 4.7 0.0 1.0
HA A:TYR63 4.7 0.0 1.0
N A:GLY48 4.8 0.0 1.0
C A:CYS64 4.8 0.0 1.0
HA A:CYS44 4.9 0.0 1.0
HD2 A:PRO66 4.9 0.0 1.0
H A:ALA45 4.9 0.0 1.0
H A:HIS68 5.0 0.0 1.0
HG3 A:LYS49 5.0 0.0 1.0
ND2 A:ASN46 5.0 0.0 1.0
HG2 A:PRO66 5.0 0.0 1.0

Reference:

X.R.Qin, T.Nagashima, F.Hayashi, S.Yokoyama. Solution Structure of the Third Lim Domain of Particularly Interesting New Cys-His Protein To Be Published.
Page generated: Wed Dec 16 03:19:28 2020

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