Zinc in PDB 1x62: Solution Structure of the Lim Domain of Carboxyl Terminal Lim Domain Protein 1

The binding sites of Zinc atom in the Solution Structure of the Lim Domain of Carboxyl Terminal Lim Domain Protein 1 (pdb code 1x62). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Lim Domain of Carboxyl Terminal Lim Domain Protein 1, PDB code: 1x62:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Lim Domain of Carboxyl Terminal Lim Domain Protein 1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Lim Domain of Carboxyl Terminal Lim Domain Protein 1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 ND1 A:HIS38 2.1 0.0 1.0 SG A:CYS21 2.3 0.0 1.0 SG A:CYS18 2.3 0.0 1.0 SG A:CYS41 2.4 0.0 1.0 HB2 A:HIS38 2.6 0.0 1.0 HB2 A:CYS18 2.8 0.0 1.0 CB A:CYS18 2.9 0.0 1.0 HB3 A:CYS18 2.9 0.0 1.0 CG A:HIS38 3.0 0.0 1.0 CE1 A:HIS38 3.1 0.0 1.0 CB A:HIS38 3.3 0.0 1.0 H A:CYS21 3.3 0.0 1.0 HB2 A:CYS41 3.4 0.0 1.0 H A:HIS38 3.4 0.0 1.0 HE1 A:HIS38 3.4 0.0 1.0 CB A:CYS41 3.5 0.0 1.0 HB3 A:LYS20 3.6 0.0 1.0 HB3 A:CYS41 3.8 0.0 1.0 CB A:CYS21 3.9 0.0 1.0 HB3 A:HIS38 4.0 0.0 1.0 HB3 A:CYS21 4.1 0.0 1.0 N A:HIS38 4.1 0.0 1.0 H A:GLY22 4.1 0.0 1.0 N A:CYS21 4.2 0.0 1.0 CD2 A:HIS38 4.2 0.0 1.0 NE2 A:HIS38 4.2 0.0 1.0 HG1 A:THR23 4.3 0.0 1.0 CA A:HIS38 4.3 0.0 1.0 CA A:CYS18 4.4 0.0 1.0 CB A:LYS20 4.6 0.0 1.0 H A:CYS41 4.6 0.0 1.0 HB2 A:CYS21 4.7 0.0 1.0 H A:LYS20 4.7 0.0 1.0 CA A:CYS21 4.7 0.0 1.0 HG12 A:ILE25 4.8 0.0 1.0 HG3 A:GLU40 4.8 0.0 1.0 HA A:CYS18 4.8 0.0 1.0 OG1 A:THR23 4.9 0.0 1.0 CA A:CYS41 4.9 0.0 1.0 HA A:ARG37 4.9 0.0 1.0 H A:THR23 4.9 0.0 1.0 HB2 A:LYS20 4.9 0.0 1.0 HA A:HIS38 4.9 0.0 1.0 H A:ASP19 4.9 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Lim Domain of Carboxyl Terminal Lim Domain Protein 1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Lim Domain of Carboxyl Terminal Lim Domain Protein 1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 ND1 A:HIS68 2.0 0.0 1.0 SG A:CYS44 2.3 0.0 1.0 SG A:CYS65 2.3 0.0 1.0 SG A:CYS47 2.3 0.0 1.0 HB3 A:ASP46 2.6 0.0 1.0 H A:CYS47 2.7 0.0 1.0 HB2 A:HIS68 2.8 0.0 1.0 CE1 A:HIS68 3.0 0.0 1.0 CG A:HIS68 3.1 0.0 1.0 H A:CYS65 3.1 0.0 1.0 HE1 A:HIS68 3.2 0.0 1.0 HB3 A:CYS44 3.4 0.0 1.0 CB A:CYS44 3.4 0.0 1.0 CB A:HIS68 3.4 0.0 1.0 HB2 A:CYS44 3.5 0.0 1.0 N A:CYS47 3.6 0.0 1.0 CB A:ASP46 3.7 0.0 1.0 CB A:CYS65 3.7 0.0 1.0 HB3 A:CYS65 3.7 0.0 1.0 CB A:CYS47 3.8 0.0 1.0 H A:GLY48 3.8 0.0 1.0 H A:HIS68 4.0 0.0 1.0 H A:ASP46 4.0 0.0 1.0 N A:CYS65 4.0 0.0 1.0 HB3 A:HIS68 4.0 0.0 1.0 HB2 A:ASP46 4.0 0.0 1.0 HB3 A:CYS47 4.1 0.0 1.0 HG21 A:THR49 4.1 0.0 1.0 HB3 A:TYR64 4.1 0.0 1.0 NE2 A:HIS68 4.1 0.0 1.0 CD2 A:HIS68 4.2 0.0 1.0 CA A:CYS47 4.3 0.0 1.0 CA A:CYS65 4.4 0.0 1.0 CA A:ASP46 4.5 0.0 1.0 CG A:ASP46 4.5 0.0 1.0 HD3 A:LYS67 4.5 0.0 1.0 N A:ASP46 4.5 0.0 1.0 HB3 A:LYS67 4.5 0.0 1.0 C A:ASP46 4.5 0.0 1.0 HB2 A:CYS65 4.5 0.0 1.0 N A:HIS68 4.6 0.0 1.0 CA A:HIS68 4.6 0.0 1.0 HB2 A:CYS47 4.6 0.0 1.0 HD1 A:TYR64 4.7 0.0 1.0 HA A:TYR64 4.7 0.0 1.0 H A:THR49 4.7 0.0 1.0 OD1 A:ASP46 4.7 0.0 1.0 N A:GLY48 4.7 0.0 1.0 CA A:CYS44 4.8 0.0 1.0 HG22 A:THR49 4.8 0.0 1.0 O A:CYS65 4.8 0.0 1.0 CG2 A:THR49 4.9 0.0 1.0 HE2 A:HIS68 5.0 0.0 1.0 H A:THR45 5.0 0.0 1.0

X.R.Qin, T.Nagashima, F.Hayashi, S.Yokoyama. Solution Structure of the Lim Domain of Carboxyl Terminal Lim Domain Protein 1 To Be Published.