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Zinc in PDB 1wys: Solution Structure of the First Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the First Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein (pdb code 1wys). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the First Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein, PDB code: 1wys:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1wys

Go back to Zinc Binding Sites List in 1wys
Zinc binding site 1 out of 2 in the Solution Structure of the First Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the First Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
ND1 A:HIS43 2.3 0.0 1.0
SG A:CYS40 2.3 0.0 1.0
SG A:CYS22 2.3 0.0 1.0
SG A:CYS17 2.4 0.0 1.0
HB2 A:HIS43 2.7 0.0 1.0
H A:CYS40 2.9 0.0 1.0
HB2 A:CYS22 3.1 0.0 1.0
CG A:HIS43 3.2 0.0 1.0
CB A:CYS17 3.2 0.0 1.0
HB2 A:CYS17 3.3 0.0 1.0
HB3 A:CYS17 3.3 0.0 1.0
CE1 A:HIS43 3.3 0.0 1.0
CB A:CYS22 3.3 0.0 1.0
HB3 A:CYS40 3.4 0.0 1.0
CB A:HIS43 3.5 0.0 1.0
HG3 A:GLN24 3.5 0.0 1.0
HB A:VAL19 3.5 0.0 1.0
CB A:CYS40 3.5 0.0 1.0
HE1 A:HIS43 3.5 0.0 1.0
HG21 A:VAL19 3.6 0.0 1.0
HB2 A:GLN24 3.7 0.0 1.0
HB3 A:CYS22 3.7 0.0 1.0
N A:CYS40 3.8 0.0 1.0
HB3 A:PHE39 3.9 0.0 1.0
HB3 A:HIS43 4.0 0.0 1.0
CG A:GLN24 4.2 0.0 1.0
HG2 A:GLN24 4.3 0.0 1.0
CA A:CYS40 4.3 0.0 1.0
H A:HIS43 4.3 0.0 1.0
HB2 A:CYS40 4.4 0.0 1.0
CD2 A:HIS43 4.4 0.0 1.0
NE2 A:HIS43 4.4 0.0 1.0
CB A:VAL19 4.4 0.0 1.0
CB A:GLN24 4.5 0.0 1.0
CG2 A:VAL19 4.5 0.0 1.0
HA A:PHE39 4.6 0.0 1.0
H A:GLN24 4.6 0.0 1.0
CA A:CYS22 4.7 0.0 1.0
CA A:HIS43 4.7 0.0 1.0
CA A:CYS17 4.7 0.0 1.0
N A:HIS43 4.7 0.0 1.0
HA A:CYS22 4.8 0.0 1.0
HG13 A:VAL19 4.8 0.0 1.0
CB A:PHE39 4.8 0.0 1.0
C A:PHE39 4.9 0.0 1.0
HG22 A:VAL19 5.0 0.0 1.0
HB2 A:GLU42 5.0 0.0 1.0
HA A:CYS17 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1wys

Go back to Zinc Binding Sites List in 1wys
Zinc binding site 2 out of 2 in the Solution Structure of the First Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the First Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS32 2.3 0.0 1.0
SG A:CYS35 2.3 0.0 1.0
NE2 A:HIS49 2.3 0.0 1.0
SG A:CYS51 2.4 0.0 1.0
H A:CYS35 2.5 0.0 1.0
HE1 A:HIS49 2.6 0.0 1.0
HE2 A:PHE39 2.7 0.0 1.0
CE1 A:HIS49 2.8 0.0 1.0
HB2 A:CYS51 3.0 0.0 1.0
CB A:CYS51 3.2 0.0 1.0
N A:CYS35 3.4 0.0 1.0
HB3 A:CYS32 3.5 0.0 1.0
CB A:CYS35 3.5 0.0 1.0
CB A:CYS32 3.5 0.0 1.0
HB3 A:CYS35 3.5 0.0 1.0
HA A:CYS51 3.6 0.0 1.0
CD2 A:HIS49 3.6 0.0 1.0
CE2 A:PHE39 3.6 0.0 1.0
HA3 A:GLY34 3.7 0.0 1.0
HZ A:PHE39 3.7 0.0 1.0
HB2 A:CYS32 3.8 0.0 1.0
HG2 A:LYS46 3.9 0.0 1.0
CA A:CYS51 4.0 0.0 1.0
CA A:CYS35 4.0 0.0 1.0
ND1 A:HIS49 4.1 0.0 1.0
CZ A:PHE39 4.1 0.0 1.0
HD2 A:HIS49 4.1 0.0 1.0
HB3 A:CYS51 4.1 0.0 1.0
HA A:LYS46 4.3 0.0 1.0
C A:GLY34 4.3 0.0 1.0
H A:GLY34 4.3 0.0 1.0
CA A:GLY34 4.4 0.0 1.0
HB2 A:CYS35 4.4 0.0 1.0
H A:SER52 4.4 0.0 1.0
CG A:HIS49 4.5 0.0 1.0
H A:GLY37 4.5 0.0 1.0
N A:GLY34 4.6 0.0 1.0
CD2 A:PHE39 4.7 0.0 1.0
H A:SER36 4.8 0.0 1.0
HD1 A:HIS49 4.8 0.0 1.0
H A:GLU53 4.8 0.0 1.0
HD3 A:LYS46 4.8 0.0 1.0
C A:CYS35 4.8 0.0 1.0
HD2 A:PHE39 4.9 0.0 1.0
CA A:CYS32 4.9 0.0 1.0
HA A:CYS35 4.9 0.0 1.0
HE2 A:LYS46 4.9 0.0 1.0
CG A:LYS46 4.9 0.0 1.0
H A:CYS51 5.0 0.0 1.0

Reference:

T.Tomizawa, T.Kigawa, S.Koshiba, M.Inoue, S.Yokoyama. Solution Structure of the First Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein To Be Published.
Page generated: Wed Dec 16 03:10:54 2020

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