Zinc in PDB 1wig: Solution Structure of Rsgi Ruh-019, A Lim Domain of Actin Binding Lim Protein 2 (KIAA1808 Protein) From Human Cdna
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of Rsgi Ruh-019, A Lim Domain of Actin Binding Lim Protein 2 (KIAA1808 Protein) From Human Cdna
(pdb code 1wig). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of Rsgi Ruh-019, A Lim Domain of Actin Binding Lim Protein 2 (KIAA1808 Protein) From Human Cdna, PDB code: 1wig:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1wig
Go back to
Zinc Binding Sites List in 1wig
Zinc binding site 1 out
of 2 in the Solution Structure of Rsgi Ruh-019, A Lim Domain of Actin Binding Lim Protein 2 (KIAA1808 Protein) From Human Cdna
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of Rsgi Ruh-019, A Lim Domain of Actin Binding Lim Protein 2 (KIAA1808 Protein) From Human Cdna within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
ND1
|
A:HIS28
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS11
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS31
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS8
|
2.3
|
0.0
|
1.0
|
HB2
|
A:HIS28
|
2.6
|
0.0
|
1.0
|
CG
|
A:HIS28
|
3.1
|
0.0
|
1.0
|
CE1
|
A:HIS28
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS8
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS8
|
3.2
|
0.0
|
1.0
|
H
|
A:HIS28
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS31
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS11
|
3.3
|
0.0
|
1.0
|
CB
|
A:HIS28
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS8
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS31
|
3.4
|
0.0
|
1.0
|
H
|
A:CYS11
|
3.4
|
0.0
|
1.0
|
HE1
|
A:HIS28
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS11
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS31
|
3.7
|
0.0
|
1.0
|
HB3
|
A:SER10
|
4.0
|
0.0
|
1.0
|
N
|
A:HIS28
|
4.0
|
0.0
|
1.0
|
HB3
|
A:HIS28
|
4.1
|
0.0
|
1.0
|
N
|
A:CYS11
|
4.1
|
0.0
|
1.0
|
HB2
|
A:LYS13
|
4.2
|
0.0
|
1.0
|
CD2
|
A:HIS28
|
4.2
|
0.0
|
1.0
|
NE2
|
A:HIS28
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS11
|
4.2
|
0.0
|
1.0
|
CA
|
A:HIS28
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS11
|
4.4
|
0.0
|
1.0
|
H
|
A:LYS13
|
4.4
|
0.0
|
1.0
|
H
|
A:GLU12
|
4.6
|
0.0
|
1.0
|
H
|
A:CYS31
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS8
|
4.7
|
0.0
|
1.0
|
HA
|
A:TYR27
|
4.7
|
0.0
|
1.0
|
H
|
A:SER10
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS31
|
4.8
|
0.0
|
1.0
|
HA
|
A:HIS28
|
4.8
|
0.0
|
1.0
|
HG12
|
A:ILE15
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS8
|
4.9
|
0.0
|
1.0
|
HB3
|
A:TYR27
|
4.9
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1wig
Go back to
Zinc Binding Sites List in 1wig
Zinc binding site 2 out
of 2 in the Solution Structure of Rsgi Ruh-019, A Lim Domain of Actin Binding Lim Protein 2 (KIAA1808 Protein) From Human Cdna
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of Rsgi Ruh-019, A Lim Domain of Actin Binding Lim Protein 2 (KIAA1808 Protein) From Human Cdna within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
ND1
|
A:HIS56
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS59
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS37
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS34
|
2.3
|
0.0
|
1.0
|
HB2
|
A:HIS56
|
2.6
|
0.0
|
1.0
|
H
|
A:CYS37
|
2.8
|
0.0
|
1.0
|
HB3
|
A:ARG36
|
3.0
|
0.0
|
1.0
|
CG
|
A:HIS56
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS34
|
3.1
|
0.0
|
1.0
|
CE1
|
A:HIS56
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS34
|
3.2
|
0.0
|
1.0
|
CB
|
A:HIS56
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS37
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS34
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS59
|
3.5
|
0.0
|
1.0
|
HE1
|
A:HIS56
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS37
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS59
|
3.5
|
0.0
|
1.0
|
H
|
A:GLY38
|
3.6
|
0.0
|
1.0
|
N
|
A:CYS37
|
3.7
|
0.0
|
1.0
|
HB3
|
A:CYS59
|
3.8
|
0.0
|
1.0
|
H
|
A:HIS56
|
3.8
|
0.0
|
1.0
|
HB3
|
A:HIS56
|
3.8
|
0.0
|
1.0
|
CB
|
A:ARG36
|
4.1
|
0.0
|
1.0
|
H
|
A:GLN39
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS37
|
4.1
|
0.0
|
1.0
|
CD2
|
A:HIS56
|
4.2
|
0.0
|
1.0
|
HG2
|
A:ARG36
|
4.2
|
0.0
|
1.0
|
NE2
|
A:HIS56
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS37
|
4.4
|
0.0
|
1.0
|
HB2
|
A:GLN39
|
4.4
|
0.0
|
1.0
|
N
|
A:GLY38
|
4.4
|
0.0
|
1.0
|
HB2
|
A:ARG36
|
4.5
|
0.0
|
1.0
|
N
|
A:HIS56
|
4.5
|
0.0
|
1.0
|
CA
|
A:HIS56
|
4.5
|
0.0
|
1.0
|
H
|
A:CYS59
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS34
|
4.7
|
0.0
|
1.0
|
H
|
A:ARG36
|
4.7
|
0.0
|
1.0
|
C
|
A:ARG36
|
4.7
|
0.0
|
1.0
|
CG
|
A:ARG36
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS59
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS37
|
4.8
|
0.0
|
1.0
|
CA
|
A:ARG36
|
4.9
|
0.0
|
1.0
|
|
Reference:
T.Abe,
H.Hirota,
S.Koshiba,
T.Kigawa,
F.Hayashi,
S.Yokoyama.
Solution Structure of Rsgi Ruh-019, A Lim Domain of Actin Binding Lim Protein 2 (KIAA1808 Protein) From Human Cdna To Be Published.
Page generated: Wed Oct 16 20:04:03 2024
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