Zinc in PDB 1nvt: Crystal Structure of Shikimate Dehydrogenase (Aroe or MJ1084) in Complex with Nadp+

All present enzymatic activity of Crystal Structure of Shikimate Dehydrogenase (Aroe or MJ1084) in Complex with Nadp+:
1.1.1.25;

The structure of Crystal Structure of Shikimate Dehydrogenase (Aroe or MJ1084) in Complex with Nadp+, PDB code: 1nvt was solved by A.K.Padyana, S.K.Burley, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	21.96 / 2.35
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	74.650, 75.620, 118.790, 90.00, 90.00, 90.00
R / Rfree (%)	22.4 / 26

The binding sites of Zinc atom in the Crystal Structure of Shikimate Dehydrogenase (Aroe or MJ1084) in Complex with Nadp+ (pdb code 1nvt). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Shikimate Dehydrogenase (Aroe or MJ1084) in Complex with Nadp+, PDB code: 1nvt:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Shikimate Dehydrogenase (Aroe or MJ1084) in Complex with Nadp+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Shikimate Dehydrogenase (Aroe or MJ1084) in Complex with Nadp+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn290 b:46.5 occ:1.00 NE2 A:HIS19 2.2 21.6 1.0 CD2 A:HIS19 3.0 19.9 1.0 CE1 A:HIS19 3.3 17.8 1.0 CG A:HIS19 4.2 22.1 1.0 ND1 A:HIS19 4.3 23.1 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Shikimate Dehydrogenase (Aroe or MJ1084) in Complex with Nadp+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Shikimate Dehydrogenase (Aroe or MJ1084) in Complex with Nadp+ within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn291 b:36.9 occ:1.00 OE2 B:GLU22 2.2 30.6 1.0 ND1 B:HIS23 2.3 32.9 1.0 OE1 B:GLU22 2.5 27.2 1.0 CD B:GLU22 2.7 32.7 1.0 CG B:HIS23 3.0 30.9 1.0 CB B:HIS23 3.2 29.2 1.0 CE1 B:HIS23 3.3 34.3 1.0 CA B:HIS23 4.1 30.5 1.0 CD2 B:HIS23 4.1 32.2 1.0 CG B:GLU22 4.2 30.9 1.0 NE2 B:HIS23 4.2 35.3 1.0 N B:HIS23 4.4 29.7 1.0 CE2 B:TYR206 4.7 55.3 1.0 C B:GLU22 4.8 30.7 1.0

A.K.Padyana, S.K.Burley. Crystal Structure of Shikimate 5-Dehydrogenase (Sdh) Bound to Nadp: Insights Into Function and Evolution Structure V. 11 1005 2003.
ISSN: ISSN 0969-2126
PubMed: 12906831
DOI: 10.1016/S0969-2126(03)00159-X