Zinc in PDB 1mm3: Solution Structure of the 2ND Phd Domain From MI2B with C- Terminal Loop Replaced By Corresponding Loop From Wstf

The binding sites of Zinc atom in the Solution Structure of the 2ND Phd Domain From MI2B with C- Terminal Loop Replaced By Corresponding Loop From Wstf (pdb code 1mm3). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the 2ND Phd Domain From MI2B with C- Terminal Loop Replaced By Corresponding Loop From Wstf, PDB code: 1mm3:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the 2ND Phd Domain From MI2B with C- Terminal Loop Replaced By Corresponding Loop From Wstf


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the 2ND Phd Domain From MI2B with C- Terminal Loop Replaced By Corresponding Loop From Wstf within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn62 b:0.0 occ:1.00 SG A:CYS50 2.3 0.0 1.0 SG A:CYS53 2.3 0.0 1.0 SG A:CYS24 2.3 0.0 1.0 SG A:CYS27 2.3 0.0 1.0 HB2 A:CYS53 3.0 0.0 1.0 HB2 A:CYS27 3.1 0.0 1.0 HB3 A:CYS50 3.1 0.0 1.0 HB3 A:CYS24 3.3 0.0 1.0 CB A:CYS24 3.3 0.0 1.0 CB A:CYS53 3.3 0.0 1.0 CB A:CYS27 3.3 0.0 1.0 CB A:CYS50 3.3 0.0 1.0 HG1 A:THR26 3.3 0.0 1.0 H A:CYS27 3.4 0.0 1.0 HG A:SER29 3.5 0.0 1.0 HB2 A:CYS24 3.5 0.0 1.0 HB2 A:CYS50 3.8 0.0 1.0 H A:CYS50 3.9 0.0 1.0 HE2 A:TYR31 3.9 0.0 1.0 HE2 A:HIS7 3.9 0.0 1.0 HB2 A:SER29 4.0 0.0 1.0 HE21 A:GLN49 4.0 0.0 1.0 HB3 A:CYS53 4.0 0.0 1.0 OG1 A:THR26 4.1 0.0 1.0 HB3 A:CYS27 4.1 0.0 1.0 N A:CYS27 4.1 0.0 1.0 CA A:CYS27 4.2 0.0 1.0 HA A:CYS53 4.2 0.0 1.0 OG A:SER29 4.3 0.0 1.0 CA A:CYS53 4.3 0.0 1.0 HH A:TYR31 4.4 0.0 1.0 H A:CYS24 4.4 0.0 1.0 H A:SER29 4.5 0.0 1.0 HG2 A:GLN49 4.5 0.0 1.0 O A:CYS27 4.5 0.0 1.0 C A:CYS27 4.6 0.0 1.0 N A:CYS50 4.6 0.0 1.0 CA A:CYS50 4.6 0.0 1.0 H A:CYS53 4.6 0.0 1.0 N A:CYS53 4.6 0.0 1.0 CB A:SER29 4.7 0.0 1.0 CA A:CYS24 4.7 0.0 1.0 NE2 A:HIS7 4.8 0.0 1.0 H A:THR26 4.8 0.0 1.0 NE2 A:GLN49 4.9 0.0 1.0 CE2 A:TYR31 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the 2ND Phd Domain From MI2B with C- Terminal Loop Replaced By Corresponding Loop From Wstf


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the 2ND Phd Domain From MI2B with C- Terminal Loop Replaced By Corresponding Loop From Wstf within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn63 b:0.0 occ:1.00 ND1 A:HIS32 2.0 0.0 1.0 HG A:CYS12 2.3 0.0 1.0 SG A:CYS12 2.3 0.0 1.0 SG A:CYS15 2.3 0.0 1.0 SG A:CYS35 2.3 0.0 1.0 H A:HIS32 2.7 0.0 1.0 HB2 A:HIS32 3.0 0.0 1.0 CE1 A:HIS32 3.0 0.0 1.0 CG A:HIS32 3.0 0.0 1.0 HB3 A:CYS35 3.1 0.0 1.0 HB3 A:CYS12 3.1 0.0 1.0 N A:HIS32 3.2 0.0 1.0 HE1 A:HIS32 3.2 0.0 1.0 HB2 A:CYS15 3.3 0.0 1.0 CB A:CYS12 3.3 0.0 1.0 CB A:CYS35 3.4 0.0 1.0 CB A:HIS32 3.4 0.0 1.0 CB A:CYS15 3.5 0.0 1.0 OD2 A:ASP17 3.5 0.0 1.0 HA A:TYR31 3.5 0.0 1.0 HB2 A:CYS12 3.7 0.0 1.0 H A:CYS15 3.8 0.0 1.0 CA A:HIS32 3.8 0.0 1.0 C A:TYR31 4.0 0.0 1.0 HB3 A:TYR31 4.0 0.0 1.0 HB2 A:CYS35 4.0 0.0 1.0 HB3 A:CYS15 4.1 0.0 1.0 HD1 A:TYR31 4.1 0.0 1.0 NE2 A:HIS32 4.1 0.0 1.0 CD2 A:HIS32 4.2 0.0 1.0 CA A:TYR31 4.2 0.0 1.0 HA A:HIS32 4.3 0.0 1.0 HA A:CYS35 4.4 0.0 1.0 HB3 A:HIS32 4.4 0.0 1.0 CA A:CYS35 4.4 0.0 1.0 CA A:CYS15 4.5 0.0 1.0 N A:CYS15 4.5 0.0 1.0 H A:CYS35 4.6 0.0 1.0 CA A:CYS12 4.6 0.0 1.0 CB A:TYR31 4.6 0.0 1.0 HA A:CYS12 4.6 0.0 1.0 CG A:ASP17 4.6 0.0 1.0 HB2 A:ASP17 4.7 0.0 1.0 N A:CYS35 4.8 0.0 1.0 HB A:VAL14 4.9 0.0 1.0 C A:CYS15 5.0 0.0 1.0 H A:HIS34 5.0 0.0 1.0 O A:TYR31 5.0 0.0 1.0 H A:VAL14 5.0 0.0 1.0

A.H.Y.Kwan, D.A.Gell, A.Verger, M.Crossley, J.M.Matthews, J.P.Mackay. Engineering A Protein Scaffold From A Phd Finger Structure V. 11 803 2003.
ISSN: ISSN 0969-2126
PubMed: 12842043
DOI: 10.1016/S0969-2126(03)00122-9