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Zinc in PDB 1k2y: Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa

Enzymatic activity of Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa

All present enzymatic activity of Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa:
5.4.2.8;

Protein crystallography data

The structure of Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa, PDB code: 1k2y was solved by C.Regni, P.A.Tipton, L.J.Beamer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 71.064, 71.306, 96.586, 90.00, 90.00, 90.00
R / Rfree (%) 16.8 / 19.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa (pdb code 1k2y). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa, PDB code: 1k2y:

Zinc binding site 1 out of 1 in 1k2y

Go back to Zinc Binding Sites List in 1k2y
Zinc binding site 1 out of 1 in the Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Zn500

b:29.9
occ:1.00
 O1 X:TLA999 1.9 31.4 1.0
OD1 X:ASP246 1.9 26.2 1.0
OD2 X:ASP242 1.9 27.6 1.0
OD2 X:ASP244 2.0 26.3 1.0
C1 X:TLA999 2.8 32.1 1.0
CG X:ASP242 2.9 27.2 1.0
CG X:ASP246 2.9 25.7 1.0
CG X:ASP244 3.0 28.3 1.0
O11 X:TLA999 3.1 30.4 1.0
OD1 X:ASP242 3.1 24.9 1.0
OD2 X:ASP246 3.2 27.2 1.0
OD1 X:ASP244 3.2 25.0 1.0
NZ X:LYS118 3.9 28.8 1.0
CB X:ALA108 4.1 31.0 1.0
N X:ASP246 4.1 26.4 1.0
NE X:ARG247 4.1 32.1 1.0
CB X:ASP246 4.2 26.0 1.0
C2 X:TLA999 4.2 32.8 1.0
CB X:ASP242 4.2 28.1 1.0
CB X:ASP244 4.4 25.2 1.0
N X:ASP244 4.5 26.5 1.0
CA X:ASP246 4.5 25.3 1.0
CG X:ARG247 4.5 28.1 1.0
CA X:ALA108 4.5 29.8 1.0
O2 X:TLA999 4.6 31.4 1.0
N X:ARG247 4.6 26.1 1.0
N X:GLY245 4.6 24.9 1.0
NH2 X:ARG247 4.7 33.7 1.0
C X:ASP246 4.7 27.1 1.0
CA X:ASP244 4.7 26.4 1.0
NE2 X:HIS329 4.8 34.7 1.0
CD X:ARG247 4.9 31.3 1.0
C X:ASP244 4.9 26.3 1.0
CZ X:ARG247 4.9 34.2 1.0
C X:ALA108 4.9 30.3 1.0
N X:HIS109 4.9 31.0 1.0
CB X:ARG247 5.0 27.8 1.0
O3 X:TLA999 5.0 33.4 1.0

Reference:

C.Regni, P.A.Tipton, L.J.Beamer. Crystal Structure of Pmm/Pgm: An Enzyme in the Biosynthetic Pathway of P. Aeruginosa Virulence Factors. Structure V. 10 269 2002.
ISSN: ISSN 0969-2126
PubMed: 11839312
DOI: 10.1016/S0969-2126(02)00705-0
Page generated: Wed Dec 16 02:54:21 2020

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