Zinc in PDB 1jvi: The 2.2 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Ribosilhomocysteine Complex

The structure of The 2.2 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Ribosilhomocysteine Complex, PDB code: 1jvi was solved by S.N.Ruzheinikov, S.K.Das, S.E.Sedelnikova, A.Hartley, S.J.Foster, M.J.Horsburgh, A.G.Cox, C.W.Mccleod, A.Mekhalfia, G.M.Blackburn, D.W.Rice, P.J.Baker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 2.20
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	62.095, 62.095, 150.051, 90.00, 90.00, 120.00
R / Rfree (%)	17.4 / 24.2

The binding sites of Zinc atom in the The 2.2 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Ribosilhomocysteine Complex (pdb code 1jvi). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The 2.2 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Ribosilhomocysteine Complex, PDB code: 1jvi:

Zinc binding site 1 out of 1 in the The 2.2 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Ribosilhomocysteine Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The 2.2 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Ribosilhomocysteine Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn300 b:61.0 occ:1.00 NE2 A:HIS54 2.2 37.5 1.0 NE2 A:HIS58 2.4 44.2 1.0 SG A:CYS126 2.4 33.8 1.0 O3 A:RHC401 3.0 37.6 1.0 CE1 A:HIS54 3.0 34.3 1.0 O2 A:RHC401 3.2 52.9 1.0 CE1 A:HIS58 3.2 39.2 1.0 C1 A:RHC401 3.3 67.5 1.0 CD2 A:HIS54 3.3 40.3 1.0 CB A:CYS126 3.4 40.3 1.0 CD2 A:HIS58 3.5 43.4 1.0 C2 A:RHC401 3.6 64.4 1.0 C3 A:RHC401 3.7 72.2 1.0 CA A:CYS126 3.8 30.3 1.0 O4 A:RHC401 3.9 76.1 1.0 N A:GLY127 3.9 34.9 1.0 C4 A:RHC401 4.1 71.0 1.0 NE2 A:HIS132 4.2 33.3 1.0 ND1 A:HIS54 4.2 28.7 1.0 C A:CYS126 4.3 32.7 1.0 CE1 A:HIS132 4.3 40.7 1.0 O1 A:RHC401 4.4 52.8 1.0 ND1 A:HIS58 4.4 43.0 1.0 CG A:HIS54 4.4 31.5 1.0 CG A:HIS58 4.6 43.2 1.0 N A:GLN128 4.6 35.6 1.0 OE1 A:GLU57 4.8 37.7 1.0 CA A:GLY127 5.0 33.7 1.0

S.N.Ruzheinikov, S.K.Das, S.E.Sedelnikova, A.Hartley, S.J.Foster, M.J.Horsburgh, A.G.Cox, C.W.Mccleod, A.Mekhalfia, G.M.Blackburn, D.W.Rice, P.J.Baker. The 1.2 A Structure of A Novel Quorum-Sensing Protein, Bacillus Subtilis Luxs J.Mol.Biol. V. 313 111 2001.
ISSN: ISSN 0022-2836
PubMed: 11601850
DOI: 10.1006/JMBI.2001.5027