Zinc in PDB 1j2o: Structure of FLIN2, A Complex Containing the N-Terminal Lim Domain of LMO2 and LDB1-Lid

The binding sites of Zinc atom in the Structure of FLIN2, A Complex Containing the N-Terminal Lim Domain of LMO2 and LDB1-Lid (pdb code 1j2o). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of FLIN2, A Complex Containing the N-Terminal Lim Domain of LMO2 and LDB1-Lid, PDB code: 1j2o:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of FLIN2, A Complex Containing the N-Terminal Lim Domain of LMO2 and LDB1-Lid


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of FLIN2, A Complex Containing the N-Terminal Lim Domain of LMO2 and LDB1-Lid within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn115 b:0.0 occ:1.00 ND1 A:HIS27 2.0 0.0 1.0 SG A:CYS9 2.3 0.0 1.0 SG A:CYS6 2.3 0.0 1.0 SG A:CYS30 2.3 0.0 1.0 HB2 A:HIS27 2.7 0.0 1.0 H A:CYS9 2.8 0.0 1.0 CE1 A:HIS27 3.0 0.0 1.0 CG A:HIS27 3.0 0.0 1.0 HB3 A:CYS6 3.1 0.0 1.0 HB3 A:CYS9 3.2 0.0 1.0 HE1 A:HIS27 3.2 0.0 1.0 CB A:CYS6 3.3 0.0 1.0 CB A:CYS9 3.3 0.0 1.0 HB2 A:CYS30 3.3 0.0 1.0 CB A:CYS30 3.4 0.0 1.0 CB A:HIS27 3.4 0.0 1.0 HB3 A:CYS30 3.5 0.0 1.0 N A:CYS9 3.5 0.0 1.0 HB2 A:CYS6 3.6 0.0 1.0 H A:GLN10 3.8 0.0 1.0 CA A:CYS9 4.0 0.0 1.0 HB3 A:HIS27 4.0 0.0 1.0 H A:GLY8 4.1 0.0 1.0 NE2 A:HIS27 4.1 0.0 1.0 CD2 A:HIS27 4.2 0.0 1.0 H A:GLN11 4.2 0.0 1.0 HB2 A:CYS9 4.2 0.0 1.0 HG2 A:GLN11 4.2 0.0 1.0 HA3 A:GLY8 4.4 0.0 1.0 N A:HIS27 4.5 0.0 1.0 N A:GLN10 4.5 0.0 1.0 H A:HIS27 4.5 0.0 1.0 CA A:HIS27 4.5 0.0 1.0 C A:GLY8 4.6 0.0 1.0 C A:CYS9 4.6 0.0 1.0 CA A:CYS6 4.7 0.0 1.0 CA A:CYS30 4.8 0.0 1.0 N A:GLY8 4.8 0.0 1.0 HG3 A:GLN11 4.8 0.0 1.0 CA A:GLY8 4.8 0.0 1.0 HG12 A:ILE13 4.8 0.0 1.0 HA A:CYS9 4.9 0.0 1.0 HA A:TRP26 5.0 0.0 1.0 HA A:CYS30 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Structure of FLIN2, A Complex Containing the N-Terminal Lim Domain of LMO2 and LDB1-Lid


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of FLIN2, A Complex Containing the N-Terminal Lim Domain of LMO2 and LDB1-Lid within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn116 b:0.0 occ:1.00 OD2 A:ASP59 2.0 0.0 1.0 SG A:CYS36 2.2 0.0 1.0 SG A:CYS33 2.3 0.0 1.0 SG A:CYS56 2.3 0.0 1.0 H A:CYS36 2.4 0.0 1.0 CG A:ASP59 2.8 0.0 1.0 HB2 A:CYS33 3.0 0.0 1.0 HB2 A:CYS56 3.1 0.0 1.0 H A:LEU35 3.2 0.0 1.0 HB2 A:CYS36 3.2 0.0 1.0 CB A:CYS36 3.2 0.0 1.0 N A:CYS36 3.3 0.0 1.0 OD1 A:ASP59 3.3 0.0 1.0 CB A:CYS33 3.3 0.0 1.0 CB A:CYS56 3.3 0.0 1.0 H A:ASP34 3.4 0.0 1.0 H A:CYS56 3.4 0.0 1.0 H A:GLY37 3.5 0.0 1.0 HH22 A:ARG95 3.6 0.0 1.0 HG A:CYS38 3.7 0.0 1.0 CA A:CYS36 3.8 0.0 1.0 HB2 A:ASP59 3.9 0.0 1.0 HB3 A:CYS56 4.0 0.0 1.0 N A:LEU35 4.0 0.0 1.0 HB3 A:CYS33 4.0 0.0 1.0 CB A:ASP59 4.0 0.0 1.0 SG A:CYS38 4.0 0.0 1.0 N A:ASP34 4.1 0.0 1.0 HB3 A:CYS36 4.2 0.0 1.0 N A:CYS56 4.2 0.0 1.0 HB3 A:LEU35 4.3 0.0 1.0 H A:CYS38 4.3 0.0 1.0 CA A:CYS33 4.3 0.0 1.0 C A:LEU35 4.3 0.0 1.0 N A:GLY37 4.4 0.0 1.0 HA A:CYS33 4.4 0.0 1.0 CA A:CYS56 4.4 0.0 1.0 H A:ASP59 4.5 0.0 1.0 NH2 A:ARG95 4.6 0.0 1.0 CA A:LEU35 4.6 0.0 1.0 C A:CYS36 4.6 0.0 1.0 HA A:CYS36 4.6 0.0 1.0 C A:CYS33 4.6 0.0 1.0 HB3 A:ASP59 4.8 0.0 1.0 HH21 A:ARG95 4.8 0.0 1.0 N A:ASP59 4.9 0.0 1.0 HB2 A:ARG58 4.9 0.0 1.0 CA A:ASP59 4.9 0.0 1.0 HA A:LEU55 4.9 0.0 1.0 C A:ASP34 5.0 0.0 1.0 CB A:LEU35 5.0 0.0 1.0

J.E.Deane, J.P.Mackay, A.H.Kwan, E.Y.Sum, J.E.Visvader, J.M.Matthews. Structural Basis For the Recognition of LDB1 By the N-Terminal Lim Domains of LMO2 and LMO4 Embo J. V. 22 2224 2003.
ISSN: ISSN 0261-4189
PubMed: 12727888
DOI: 10.1093/EMBOJ/CDG196