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Zinc in PDB 1f81: Solution Structure of the TAZ2 Domain of the Transcriptional Adaptor Protein Cbp

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the TAZ2 Domain of the Transcriptional Adaptor Protein Cbp (pdb code 1f81). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Solution Structure of the TAZ2 Domain of the Transcriptional Adaptor Protein Cbp, PDB code: 1f81:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 1f81

Go back to Zinc Binding Sites List in 1f81
Zinc binding site 1 out of 3 in the Solution Structure of the TAZ2 Domain of the Transcriptional Adaptor Protein Cbp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the TAZ2 Domain of the Transcriptional Adaptor Protein Cbp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn88

b:0.0
occ:1.00
NE2 A:HIS19 2.1 0.0 1.0
SG A:CYS28 2.3 0.0 1.0
SG A:CYS23 2.3 0.0 1.0
SG A:CYS33 2.3 0.0 1.0
CD2 A:HIS19 2.9 0.0 1.0
HD2 A:HIS19 3.0 0.0 1.0
CB A:CYS28 3.0 0.0 1.0
HB3 A:CYS28 3.1 0.0 1.0
HB2 A:CYS23 3.1 0.0 1.0
HB2 A:CYS28 3.1 0.0 1.0
HB2 A:CYS33 3.1 0.0 1.0
CB A:CYS23 3.1 0.0 1.0
HB3 A:CYS23 3.1 0.0 1.0
CB A:CYS33 3.2 0.0 1.0
CE1 A:HIS19 3.3 0.0 1.0
HB3 A:CYS33 3.3 0.0 1.0
HD12 A:LEU30 3.5 0.0 1.0
HB2 A:LEU30 3.6 0.0 1.0
HE1 A:HIS19 3.6 0.0 1.0
HA A:ALA20 3.8 0.0 1.0
HZ1 A:LYS37 3.8 0.0 1.0
CG A:HIS19 4.2 0.0 1.0
HD13 A:LEU30 4.2 0.0 1.0
HZ3 A:LYS37 4.2 0.0 1.0
HE3 A:LYS37 4.3 0.0 1.0
ND1 A:HIS19 4.3 0.0 1.0
CD1 A:LEU30 4.3 0.0 1.0
NZ A:LYS37 4.4 0.0 1.0
CA A:CYS28 4.5 0.0 1.0
CA A:CYS23 4.6 0.0 1.0
CB A:LEU30 4.6 0.0 1.0
CA A:CYS33 4.6 0.0 1.0
HB3 A:ASN25 4.7 0.0 1.0
HB3 A:LEU30 4.8 0.0 1.0
CA A:ALA20 4.8 0.0 1.0
HA A:CYS28 4.9 0.0 1.0
HA A:CYS33 4.9 0.0 1.0
HA A:CYS23 4.9 0.0 1.0
O A:CYS23 4.9 0.0 1.0
CE A:LYS37 4.9 0.0 1.0
O A:ASN25 5.0 0.0 1.0

Zinc binding site 2 out of 3 in 1f81

Go back to Zinc Binding Sites List in 1f81
Zinc binding site 2 out of 3 in the Solution Structure of the TAZ2 Domain of the Transcriptional Adaptor Protein Cbp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the TAZ2 Domain of the Transcriptional Adaptor Protein Cbp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn89

b:0.0
occ:1.00
NE2 A:HIS42 2.1 0.0 1.0
SG A:CYS54 2.3 0.0 1.0
SG A:CYS57 2.3 0.0 1.0
SG A:CYS46 2.3 0.0 1.0
HB3 A:CYS46 2.7 0.0 1.0
CB A:CYS46 2.9 0.0 1.0
HB2 A:CYS46 3.1 0.0 1.0
HB3 A:CYS54 3.1 0.0 1.0
CE1 A:HIS42 3.1 0.0 1.0
CD2 A:HIS42 3.1 0.0 1.0
CB A:CYS54 3.1 0.0 1.0
HD2 A:HIS42 3.3 0.0 1.0
HE1 A:HIS42 3.3 0.0 1.0
H A:CYS57 3.4 0.0 1.0
HB2 A:CYS54 3.4 0.0 1.0
HB A:VAL56 3.5 0.0 1.0
HA A:THR43 3.8 0.0 1.0
CB A:CYS57 3.9 0.0 1.0
HB2 A:CYS57 4.0 0.0 1.0
HA A:LYS49 4.1 0.0 1.0
N A:CYS57 4.2 0.0 1.0
ND1 A:HIS42 4.3 0.0 1.0
CG A:HIS42 4.3 0.0 1.0
CA A:CYS46 4.4 0.0 1.0
O A:CYS46 4.4 0.0 1.0
H A:LYS49 4.4 0.0 1.0
CB A:VAL56 4.5 0.0 1.0
CA A:CYS54 4.6 0.0 1.0
CA A:CYS57 4.6 0.0 1.0
HB3 A:CYS57 4.6 0.0 1.0
O A:HIS42 4.6 0.0 1.0
H A:VAL56 4.8 0.0 1.0
HB2 A:ARG48 4.8 0.0 1.0
HG11 A:VAL56 4.9 0.0 1.0
CA A:THR43 4.9 0.0 1.0
HA A:CYS46 4.9 0.0 1.0
C A:CYS46 4.9 0.0 1.0
H A:CYS46 4.9 0.0 1.0
HA A:CYS57 4.9 0.0 1.0
N A:LYS49 5.0 0.0 1.0
HA A:CYS54 5.0 0.0 1.0

Zinc binding site 3 out of 3 in 1f81

Go back to Zinc Binding Sites List in 1f81
Zinc binding site 3 out of 3 in the Solution Structure of the TAZ2 Domain of the Transcriptional Adaptor Protein Cbp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Solution Structure of the TAZ2 Domain of the Transcriptional Adaptor Protein Cbp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn90

b:0.0
occ:1.00
NE2 A:HIS67 2.1 0.0 1.0
SG A:CYS76 2.3 0.0 1.0
SG A:CYS71 2.3 0.0 1.0
SG A:CYS81 2.3 0.0 1.0
HB2 A:CYS76 2.8 0.0 1.0
CB A:CYS76 2.9 0.0 1.0
HB3 A:CYS71 2.9 0.0 1.0
HB3 A:CYS76 2.9 0.0 1.0
CB A:CYS71 3.0 0.0 1.0
CD2 A:HIS67 3.1 0.0 1.0
CE1 A:HIS67 3.1 0.0 1.0
HB2 A:CYS71 3.2 0.0 1.0
HD2 A:HIS67 3.3 0.0 1.0
HE1 A:HIS67 3.3 0.0 1.0
HB2 A:CYS81 3.3 0.0 1.0
HB A:VAL78 3.4 0.0 1.0
CB A:CYS81 3.4 0.0 1.0
HB3 A:CYS81 3.7 0.0 1.0
HA A:ALA68 4.1 0.0 1.0
ND1 A:HIS67 4.2 0.0 1.0
CG A:HIS67 4.2 0.0 1.0
HB3 A:GLU73 4.4 0.0 1.0
O A:GLU73 4.4 0.0 1.0
CA A:CYS76 4.4 0.0 1.0
CB A:VAL78 4.4 0.0 1.0
HG22 A:VAL78 4.5 0.0 1.0
CA A:CYS71 4.5 0.0 1.0
O A:CYS71 4.7 0.0 1.0
HA A:CYS76 4.7 0.0 1.0
H A:VAL78 4.7 0.0 1.0
HG13 A:VAL78 4.8 0.0 1.0
HG21 A:VAL78 4.8 0.0 1.0
CG2 A:VAL78 4.8 0.0 1.0
CA A:CYS81 4.8 0.0 1.0
HA A:CYS71 4.9 0.0 1.0
HA A:CYS81 5.0 0.0 1.0
HD2 A:PRO77 5.0 0.0 1.0
O A:HIS67 5.0 0.0 1.0
C A:CYS71 5.0 0.0 1.0

Reference:

R.N.De Guzman, H.Y.Liu, M.Martinez-Yamout, H.J.Dyson, P.E.Wright. Solution Structure of the TAZ2 (CH3) Domain of the Transcriptional Adaptor Protein Cbp. J.Mol.Biol. V. 303 243 2000.
ISSN: ISSN 0022-2836
PubMed: 11023789
DOI: 10.1006/JMBI.2000.4141
Page generated: Wed Dec 16 02:49:08 2020

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