Zinc in PDB 1f5e: Structure of Transcriptional Factor Alcr in Complex with A Target Dna

The binding sites of Zinc atom in the Structure of Transcriptional Factor Alcr in Complex with A Target Dna (pdb code 1f5e). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Transcriptional Factor Alcr in Complex with A Target Dna, PDB code: 1f5e:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of Transcriptional Factor Alcr in Complex with A Target Dna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Transcriptional Factor Alcr in Complex with A Target Dna within 5.0Å range: probe atom residue distance (Å) B Occ P:Zn64 b:0.3 occ:1.00 SG P:CYS22 2.2 0.7 1.0 SG P:CYS15 2.2 0.7 1.0 SG P:CYS12 2.3 0.9 1.0 SG P:CYS39 2.4 0.4 1.0 H P:CYS12 2.4 0.3 1.0 HB2 P:CYS22 2.7 1.6 1.0 HB2 P:ASN41 2.9 0.7 1.0 HB3 P:CYS22 2.9 1.8 1.0 CB P:CYS22 2.9 1.1 1.0 ZN P:ZN65 3.1 0.6 1.0 HB2 P:CYS15 3.2 0.3 1.0 CB P:CYS12 3.3 0.6 1.0 HD21 P:ASN41 3.3 0.6 1.0 N P:CYS12 3.3 0.3 1.0 CB P:CYS15 3.4 0.3 1.0 CB P:CYS39 3.4 0.5 1.0 HB3 P:CYS39 3.4 0.6 1.0 HB2 P:CYS12 3.5 1.2 1.0 HB2 P:CYS39 3.5 0.6 1.0 HB3 P:CYS12 3.7 1.2 1.0 HB3 P:CYS15 3.9 0.6 1.0 H P:CYS42 3.9 0.4 1.0 HA P:SER11 3.9 0.6 1.0 CB P:ASN41 3.9 0.6 1.0 ND2 P:ASN41 3.9 0.6 1.0 CA P:CYS12 3.9 0.4 1.0 H P:ASN41 4.0 0.6 1.0 HB3 P:SER11 4.0 0.9 1.0 CG P:ASN41 4.2 0.7 1.0 HB3 P:ALA24 4.3 1.2 1.0 CA P:CYS22 4.3 0.7 1.0 H P:CYS15 4.3 0.3 1.0 HE1 P:PHE51 4.3 0.4 1.0 HB3 P:ASN41 4.4 0.6 1.0 HG2 P:PRO14 4.4 0.4 1.0 C P:SER11 4.4 0.5 1.0 HB2 P:ALA24 4.5 1.0 1.0 CA P:CYS15 4.5 0.2 1.0 CA P:SER11 4.5 0.5 1.0 HB1 P:ALA24 4.5 1.1 1.0 HD22 P:ASN41 4.5 0.6 1.0 H P:ASP23 4.5 0.5 1.0 H P:ALA24 4.6 0.3 1.0 CB P:ALA24 4.6 0.4 1.0 HA P:CYS22 4.6 1.1 1.0 HA P:CYS15 4.7 0.3 1.0 SG P:CYS42 4.7 1.1 1.0 H P:CYS39 4.7 0.3 1.0 CB P:SER11 4.7 0.6 1.0 HA P:CYS12 4.7 0.5 1.0 N P:CYS15 4.7 0.3 1.0 CA P:CYS39 4.7 0.4 1.0 O P:ARG21 4.7 0.6 1.0 N P:ASN41 4.8 0.5 1.0 C P:CYS12 4.8 0.3 1.0 SG P:CYS49 4.8 0.6 1.0 N P:CYS42 4.8 0.3 1.0 H P:SER40 4.9 0.8 1.0 N P:CYS22 4.9 0.4 1.0 O P:CYS12 4.9 0.3 1.0 CA P:ASN41 4.9 0.4 1.0 O P:ARG20 5.0 0.4 1.0 HA P:CYS49 5.0 0.5 1.0

Zinc binding site 2 out of 2 in the Structure of Transcriptional Factor Alcr in Complex with A Target Dna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Transcriptional Factor Alcr in Complex with A Target Dna within 5.0Å range: probe atom residue distance (Å) B Occ P:Zn65 b:0.6 occ:1.00 SG P:CYS42 2.2 1.1 1.0 SG P:CYS12 2.3 0.9 1.0 SG P:CYS49 2.3 0.6 1.0 SG P:CYS39 2.3 0.4 1.0 HA P:CYS49 2.4 0.5 1.0 H P:CYS39 2.6 0.3 1.0 ZN P:ZN64 3.1 0.3 1.0 H P:CYS42 3.1 0.4 1.0 HB3 P:CYS39 3.1 0.6 1.0 CB P:CYS49 3.1 0.5 1.0 CA P:CYS49 3.2 0.4 1.0 HB2 P:CYS42 3.2 1.1 1.0 CB P:CYS42 3.2 0.6 1.0 HB3 P:CYS12 3.2 1.2 1.0 CB P:CYS39 3.3 0.5 1.0 HB2 P:CYS12 3.3 1.2 1.0 HB2 P:CYS49 3.3 0.6 1.0 CB P:CYS12 3.4 0.6 1.0 N P:CYS39 3.4 0.2 1.0 HB3 P:CYS42 3.4 1.3 1.0 HA P:SER38 3.9 0.4 1.0 HG2 P:PRO14 3.9 0.4 1.0 HB2 P:ASN41 3.9 0.7 1.0 N P:CYS42 3.9 0.3 1.0 CA P:CYS39 3.9 0.4 1.0 N P:CYS49 3.9 0.4 1.0 H P:CYS49 4.1 0.4 1.0 HB3 P:CYS49 4.1 0.6 1.0 CA P:CYS42 4.2 0.4 1.0 HB2 P:CYS39 4.2 0.6 1.0 HB3 P:ALA24 4.2 1.2 1.0 HB1 P:ALA24 4.3 1.1 1.0 H P:THR50 4.3 0.3 1.0 HB2 P:ALA24 4.4 1.0 1.0 C P:CYS49 4.4 0.4 1.0 C P:SER38 4.4 0.3 1.0 HE1 P:TRP36 4.5 0.4 1.0 HG3 P:PRO14 4.6 0.6 1.0 H P:CYS12 4.6 0.3 1.0 CB P:ALA24 4.6 0.4 1.0 CA P:SER38 4.6 0.4 1.0 HZ2 P:TRP36 4.6 1.0 1.0 C P:CYS39 4.6 0.4 1.0 CG P:PRO14 4.7 0.5 1.0 SG P:CYS15 4.7 0.7 1.0 H P:ASN41 4.7 0.6 1.0 HD2 P:PRO14 4.7 0.4 1.0 H P:LYS43 4.7 0.4 1.0 HE1 P:PHE51 4.7 0.4 1.0 N P:THR50 4.7 0.3 1.0 SG P:CYS22 4.8 0.7 1.0 CA P:CYS12 4.8 0.4 1.0 HA P:CYS39 4.8 0.5 1.0 HA P:CYS42 4.9 0.5 1.0 CB P:ASN41 4.9 0.6 1.0 C P:ASP48 4.9 0.4 1.0 O P:CYS39 4.9 0.4 1.0

B.Cahuzac, R.Cerdan, B.Felenbok, E.Guittet. The Solution Structure of An Alcr-Dna Complex Sheds Light Onto the Unique Tight and Monomeric Dna Binding of A Zn(2)Cys(6) Protein. Structure V. 9 827 2001.
ISSN: ISSN 0969-2126
PubMed: 11566132
DOI: 10.1016/S0969-2126(01)00640-2