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Zinc in PDB, part 139 (files: 5521-5560), PDB 3gqf-3h1w

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 5521-5560 (PDB 3gqf-3h1w).
  1. 3gqf (Zn: 6) - Structural and Biophysical Properties of the Pathogenic SOD1 Variant H46R/H48Q
    Other atoms: Ca (5);
  2. 3grb (Zn: 12) - Crystal Structure of the F87M/L110M Mutant of Human Transthyretin at pH 6.5
  3. 3grg (Zn: 12) - Crystal Structure of the F87M/L110M Mutant of Human Transthyretin at pH 7.5
  4. 3gri (Zn: 2) - The Crystal Structure of A Dihydroorotase From Staphylococcus Aureus
    Other atoms: Cl (3); Ca (4);
  5. 3gs2 (Zn: 1) - RING1B C-Terminal Domain/CBX7 Cbox Complex
  6. 3gsh (Zn: 4) - Three-Dimensional Structure of A Post Translational Modified Barley LTP1
    Other atoms: F (6); Na (3);
  7. 3gt9 (Zn: 2) - Structure of An Ml-Iap/Xiap Chimera Bound to A Peptidomimetic
  8. 3gta (Zn: 2) - Structure of An Ml-Iap/Xiap Chimera Bound to A Peptidomimetic
  9. 3gtg (Zn: 8) - Backtracked Rna Polymerase II Complex with 12MER Rna
    Other atoms: Mg (1);
  10. 3gtj (Zn: 8) - Backtracked Rna Polymerase II Complex with 13MER Rna
    Other atoms: Mg (1);
  11. 3gtk (Zn: 8) - Backtracked Rna Polymerase II Complex with 18MER Rna
  12. 3gtl (Zn: 8) - Backtracked Rna Polymerase II Complex with 13MER with G<>U Mismatch
    Other atoms: Mg (1);
  13. 3gtm (Zn: 9) - Co-Complex of Backtracked Rna Polymerase II with Tfiis
    Other atoms: Mg (1);
  14. 3gto (Zn: 8) - Backtracked Rna Polymerase II Complex with 15MER Rna
    Other atoms: Mg (1);
  15. 3gtp (Zn: 8) - Backtracked Rna Polymerase II Complex with 24MER Rna
    Other atoms: Mg (1);
  16. 3gtq (Zn: 8) - Backtracked Rna Polymerase II Complex Induced By Damage
  17. 3gtt (Zn: 6) - Mouse SOD1
  18. 3gtv (Zn: 12) - Human-Mouse SOD1 Chimera
  19. 3guc (Zn: 2) - Human Ubiquitin-Activating Enzyme 5 in Complex with Amppnp
  20. 3gug (Zn: 1) - Crystal Structure of AKR1C1 L308V Mutant in Complex with Nadp and 3,5-Dichlorosalicylic Acid
    Other atoms: Cl (2);
  21. 3guw (Zn: 8) - Crystal Structure of the Tatd-Like Protein (AF1765) From Archaeoglobus Fulgidus, Northeast Structural Genomics Consortium Target GR121
  22. 3gv4 (Zn: 3) - Crystal Structure of Human HDAC6 Zinc Finger Domain and Ubiquitin C-Terminal Peptide Rlrgg
    Other atoms: Ca (1);
  23. 3gwt (Zn: 1) - Catalytic Domain of Human Phosphodiesterase 4B2B in Complex with A Quinoline Inhibitor
    Other atoms: Mg (1); As (5);
  24. 3gyy (Zn: 36) - The Ectoine Binding Protein of the Teaabc Trap Transporter Teaa in the Apo-State
  25. 3gz0 (Zn: 1) - Apo-Human Carbonic Anhydrase II Revisited: Implications of the Loss of A Metal in Protein Structure, Stability and Solvent Network
  26. 3gze (Zn: 14) - Algal Prolyl 4-Hydroxylase Complexed with Zinc and (Ser- Pro)5 Peptide Substrate
  27. 3gzk (Zn: 1) - Structure of A. Acidocaldarius Cellulase Cela
    Other atoms: Ca (1);
  28. 3gzn (Zn: 2) - Structure of NEDD8-Activating Enzyme in Complex with NEDD8 and MLN4924
  29. 3gzo (Zn: 10) - Human SOD1 G93A Variant
    Other atoms: Cu (10);
  30. 3gzu (Zn: 5) - VP7 Recoated Rotavirus Dlp
  31. 3h03 (Zn: 8) - Crystal Structure of the Binding Domain of the Ampa Subunit GLUR2 Bound to UBP277
  32. 3h0g (Zn: 16) - Rna Polymerase II From Schizosaccharomyces Pombe
    Other atoms: Mg (2);
  33. 3h0l (Zn: 8) - Structure of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus
    Other atoms: Mg (8);
  34. 3h0m (Zn: 8) - Structure of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus
    Other atoms: Mg (7);
  35. 3h0n (Zn: 1) - Crystal Structure of Protein of Unknown Function DUF1470 (YP_510353.1) From Jannaschia Sp. CCS1 at 1.45 A Resolution
    Other atoms: Ni (2); Na (2);
  36. 3h0r (Zn: 8) - Structure of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus
    Other atoms: Mn (16);
  37. 3h15 (Zn: 1) - Crystal Structure of Replication Initiation Factor MCM10-Id Bound to Ssdna
  38. 3h1k (Zn: 2) - Chicken Cytochrome BC1 Complex with Zn++ and An Iodinated Derivative of Kresoxim-Methyl Bound
    Other atoms: I (2); Fe (10);
  39. 3h1m (Zn: 1) - Crystal Structure of Mannose 6-Phosphate Isomerase (Holo; Zinc Bound)
  40. 3h1w (Zn: 1) - Crystal Structure of Mannose 6-Phosphate Isomerase Bound with Zinc and Yttrium
    Other atoms: Y (1);
Page generated: Mon Dec 15 11:29:29 2025

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