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Zinc in PDB, part 114 (files: 4521-4560), PDB 2y2e-2yho

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 4521-4560 (PDB 2y2e-2yho).
  1. 2y2e (Zn: 3) - Crystal Structure of Ampd Grown at pH 5.5
  2. 2y33 (Zn: 1) - S-Nitrosylated PHD2 (Gsno Soaked) in Complex with Zn(II) and UN9
    Other atoms: Cl (1);
  3. 2y3d (Zn: 3) - Zn-Bound Form of Cupriavidus Metallidurans CH34 Cnrxs
    Other atoms: Cl (5);
  4. 2y3g (Zn: 3) - Se-Met Form of Cupriavidus Metallidurans CH34 Cnrxs
    Other atoms: Cl (3);
  5. 2y43 (Zn: 4) - RAD18 Ubiquitin Ligase Ring Domain Structure
  6. 2y4y (Zn: 6) - Structure of A Domain From the Type IV Pilus Biogenesis Lipoprotein Pilp, From Pseudomonas Aeruginosa
  7. 2y50 (Zn: 1) - Crystal Structure of Collagenase G From Clostridium Histolyticum at 2.80 Angstrom Resolution
  8. 2y5b (Zn: 2) - Structure of USP21 in Complex with Linear Diubiquitin-Aldehyde
  9. 2y5q (Zn: 3) - Listeria Monocytogenes Inlb (Internalin B) Residues 36-392
  10. 2y69 (Zn: 2) - Bovine Heart Cytochrome C Oxidase Re-Refined with Molecular Oxygen
    Other atoms: Mg (2); Fe (4); Cu (6);
  11. 2y6c (Zn: 2) - The Discovery of MMP7 Inhibitors Exploiting A Novel Selectivity Trigger
    Other atoms: F (3); Cl (1); Ca (2);
  12. 2y6d (Zn: 2) - The Discovery of MMP7 Inhibitors Exploiting A Novel Selectivity Trigger
    Other atoms: Ca (2); Br (1);
  13. 2y6e (Zn: 6) - Ubiquitin Specific Protease 4 Is Inhibited By Its Ubiquitin- Like Domain
  14. 2y6i (Zn: 1) - Crystal Structure of Collagenase G From Clostridium Histolyticum in Complex with Isoamylphosphonyl-Gly-Pro-Ala at 3.25 Angstrom Resolution
  15. 2y7d (Zn: 4) - Crystal Structure of the 3-Keto-5-Aminohexanoate Cleavage Enzyme (Kce) From Candidatus Cloacamonas Acidaminovorans (Orthorombic Form)
  16. 2y7e (Zn: 2) - Crystal Structure of the 3-Keto-5-Aminohexanoate Cleavage Enzyme (Kce) From Candidatus Cloacamonas Acidaminovorans (Tetragonal Form)
    Other atoms: Mg (1);
  17. 2y7f (Zn: 4) - Crystal Structure of the 3-Keto-5-Aminohexanoate Cleavage Enzyme (Kce)
    Other atoms: Mg (1);
  18. 2y7g (Zn: 2) - Crystal Structure of the 3-Keto-5-Aminohexanoate Cleavage Enzyme (Kce) From C. Cloacamonas Acidaminovorans in Complex with the Product Acetoacetate
    Other atoms: Mg (2);
  19. 2y7i (Zn: 6) - Tbc
  20. 2y87 (Zn: 2) - Native Vim-7. Structural and Computational Investigations of Vim-7: Insights Into the Substrate Specificity of Vim Metallo-Beta-Lactamases
    Other atoms: Mg (1);
  21. 2y8a (Zn: 2) - Vim-7 with Oxidised. Structural and Computational Investigations of Vim-7: Insights Into the Substrate Specificity of Vim Metallo-Beta-Lactamases
    Other atoms: Mg (1);
  22. 2y8b (Zn: 2) - Vim-7 with Oxidised. Structural and Computational Investigations of Vim-7: Insights Into the Substrate Specificity of Vim Metallo-Beta-Lactamases
  23. 2yac (Zn: 1) - Crystal Structure of Polo-Like Kinase 1 in Complex with Nms-P937
    Other atoms: F (3);
  24. 2yav (Zn: 6) - Zn Inhibited Sulfur Oxygenase Reductase
    Other atoms: Cl (6); Fe (6);
  25. 2yb5 (Zn: 2) - Structure of the Fusidic Acid Resistance Protein Fusc
  26. 2yb9 (Zn: 1) - Crystal Structure of Human Neutral Endopeptidase Complexed with A Heteroarylalanine Diacid.
  27. 2ybb (Zn: 1) - Fitted Model For Bovine Mitochondrial Supercomplex I1III2IV1 By Single Particle Cryo-Em (Emd-1876)
    Other atoms: Mg (7); Cu (3); Ca (1); Fe (45);
  28. 2ybg (Zn: 4) - Structure of LYS120-Acetylated P53 Core Domain
  29. 2ybk (Zn: 2) - JMJD2A Complexed with R-2-Hydroxyglutarate
    Other atoms: Cl (1); Ni (2);
  30. 2ybp (Zn: 2) - JMJD2A Complexed with R-2-Hydroxyglutarate and Histone H3K36ME3 Peptide (30-41)
    Other atoms: Ni (2);
  31. 2ybs (Zn: 2) - JMJD2A Complexed with S-2-Hydroxyglutarate and Histone H3K36ME3 Peptide (30-41)
    Other atoms: Ni (2);
  32. 2yc5 (Zn: 1) - Inhibitors of the Herbicidal Target Ispd
    Other atoms: Cd (3); Mg (1); Na (1); Cu (3); Cl (1);
  33. 2ycb (Zn: 5) - Structure of the Archaeal Beta-Casp Protein with N-Terminal Kh Domains From Methanothermobacter Thermautotrophicus
    Other atoms: K (2);
  34. 2yd0 (Zn: 1) - Crystal Structure of the Soluble Domain of Human Endoplasmic Reticulum Aminopeptidase 1 ERAP1
    Other atoms: K (2);
  35. 2ydm (Zn: 1) - Structural Characterization of Angiotensin-I Converting Enzyme in Complex with A Selenium Analogue of Captopril
    Other atoms: Cl (2);
  36. 2ygt (Zn: 3) - Clostridium Perfringens Delta-Toxin
  37. 2yhe (Zn: 12) - Structure Determination of the Stereoselective Inverting Sec-Alkylsulfatase PISA1 From Pseudomonas Sp.
  38. 2yhg (Zn: 1) - Ab Initio Phasing of A Nucleoside Hydrolase-Related Hypothetical Protein From Saccharophagus Degradans That Is Associated with Carbohydrate Metabolism
    Other atoms: Cl (2); Ca (2); Mg (3);
  39. 2yhn (Zn: 4) - The Idol-UBE2D Complex Mediates Sterol-Dependent Degradation of the Ldl Receptor
  40. 2yho (Zn: 8) - The Idol-UBE2D Complex Mediates Sterol-Dependent Degradation of the Ldl Receptor
Page generated: Mon Dec 15 11:28:31 2025

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