Zinc in PDB 8vg0: Cryo-Em Structure of GATA4 in Complex with ALBN1 Nucleosome

The binding sites of Zinc atom in the Cryo-Em Structure of GATA4 in Complex with ALBN1 Nucleosome (pdb code 8vg0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of GATA4 in Complex with ALBN1 Nucleosome, PDB code: 8vg0:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of GATA4 in Complex with ALBN1 Nucleosome


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of GATA4 in Complex with ALBN1 Nucleosome within 5.0Å range: probe atom residue distance (Å) B Occ T:Zn501 b:359.4 occ:1.00 SG T:CYS295 2.3 303.0 1.0 SG T:CYS292 2.3 288.0 1.0 SG T:CYS274 2.3 313.3 1.0 SG T:CYS271 2.3 310.5 1.0 CB T:CYS271 3.2 307.3 1.0 CB T:CYS295 3.2 299.8 1.0 CB T:CYS274 3.3 311.1 1.0 N T:CYS274 3.7 311.5 1.0 CB T:CYS292 3.8 286.2 1.0 CA T:CYS274 4.0 311.3 1.0 N T:CYS292 4.1 286.5 1.0 CA T:CYS295 4.4 298.6 1.0 OG1 T:THR276 4.4 297.2 1.0 N T:CYS295 4.4 298.0 1.0 N T:GLN275 4.5 306.9 1.0 C T:CYS274 4.5 311.6 1.0 CA T:CYS292 4.5 285.9 1.0 CB T:ASN273 4.5 303.8 1.0 CA T:CYS271 4.6 306.7 1.0 C T:ASN273 4.7 304.3 1.0 ND2 T:ASN273 4.7 303.7 1.0 O T:CYS292 5.0 286.1 1.0 N T:ASN273 5.0 303.9 1.0 CA T:ASN273 5.0 304.1 1.0

B.R.Zhou, Y.Bai. Cryo-Em Structure of GATA4 in Complex with ALBN1 Nucleosome Mol.Cell 2024.
ISSN: ISSN 1097-2765