Zinc in PDB 6u1x: Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A Resolution)

Enzymatic activity of Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A Resolution)

All present enzymatic activity of Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A Resolution):
2.1.1.296; 2.1.1.56; 2.7.7.48; 2.7.7.88;

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A Resolution) (pdb code 6u1x). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A Resolution), PDB code: 6u1x:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6u1x

Go back to Zinc Binding Sites List in 6u1x
Zinc binding site 1 out of 2 in the Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A Resolution)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A Resolution) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn3000

b:90.0
occ:1.00
OE2 A:GLU1108 2.0 65.2 1.0
SG A:CYS1299 2.3 71.7 1.0
SG A:CYS1081 2.3 67.1 1.0
SG A:CYS1302 2.3 71.7 1.0
HB3 A:CYS1302 2.8 71.7 1.0
HB3 A:CYS1299 2.9 71.7 1.0
CB A:CYS1302 3.1 71.7 1.0
CD A:GLU1108 3.2 65.2 1.0
CB A:CYS1299 3.2 71.7 1.0
H A:CYS1302 3.3 71.7 1.0
HA A:CYS1081 3.3 67.1 1.0
HG3 A:GLU1108 3.6 65.2 1.0
CB A:CYS1081 3.6 67.1 1.0
H A:SER1082 3.6 66.5 1.0
HB2 A:CYS1299 3.7 71.7 1.0
HB3 A:SER1301 3.7 70.2 1.0
N A:CYS1302 3.8 71.7 1.0
HB2 A:CYS1081 3.8 67.1 1.0
HB2 A:CYS1302 3.9 71.7 1.0
CG A:GLU1108 3.9 65.2 1.0
CA A:CYS1081 4.0 67.1 1.0
CA A:CYS1302 4.1 71.7 1.0
OE1 A:GLU1108 4.1 65.2 1.0
H A:ALA1083 4.1 68.5 1.0
O A:CYS1299 4.2 71.7 1.0
N A:SER1082 4.3 66.5 1.0
HB2 A:GLU1108 4.4 65.2 1.0
HB3 A:CYS1081 4.4 67.1 1.0
CA A:CYS1299 4.5 71.7 1.0
HA A:CYS1302 4.5 71.7 1.0
C A:CYS1299 4.6 71.7 1.0
H A:SER1301 4.6 70.2 1.0
C A:CYS1081 4.6 67.1 1.0
HA A:MET1109 4.6 66.5 1.0
CB A:SER1301 4.7 70.2 1.0
C A:SER1301 4.7 70.2 1.0
HG2 A:GLU1108 4.7 65.2 1.0
HB3 A:ALA1083 4.7 68.5 1.0
CB A:GLU1108 4.8 65.2 1.0
HA A:CYS1299 4.9 71.7 1.0
N A:ALA1083 5.0 68.5 1.0
N A:SER1301 5.0 70.2 1.0

Zinc binding site 2 out of 2 in 6u1x

Go back to Zinc Binding Sites List in 6u1x
Zinc binding site 2 out of 2 in the Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A Resolution)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A Resolution) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn3001

b:86.0
occ:1.00
ND1 A:HIS1294 2.0 65.2 1.0
NE2 A:HIS1296 2.0 66.4 1.0
SG A:CYS1123 2.2 75.8 1.0
SG A:CYS1120 2.3 74.3 1.0
HE1 A:HIS1296 2.6 66.4 1.0
CE1 A:HIS1296 2.6 66.4 1.0
CG A:HIS1294 3.0 65.2 1.0
CE1 A:HIS1294 3.0 65.2 1.0
HB3 A:HIS1294 3.1 65.2 1.0
HB2 A:HIS1294 3.1 65.2 1.0
HE1 A:HIS1294 3.2 65.2 1.0
CD2 A:HIS1296 3.3 66.4 1.0
CB A:HIS1294 3.3 65.2 1.0
HD2 A:HIS1296 3.7 66.4 1.0
CB A:CYS1123 3.7 75.8 1.0
CB A:CYS1120 3.8 74.3 1.0
HB2 A:CYS1123 3.8 75.8 1.0
HB3 A:CYS1120 3.9 74.3 1.0
ND1 A:HIS1296 3.9 66.4 1.0
NE2 A:HIS1294 4.1 65.2 1.0
CD2 A:HIS1294 4.1 65.2 1.0
HG2 A:PRO1122 4.1 73.4 1.0
CG A:HIS1296 4.2 66.4 1.0
H A:CYS1123 4.3 75.8 1.0
HB2 A:CYS1120 4.3 74.3 1.0
HA A:CYS1123 4.4 75.8 1.0
N A:CYS1123 4.4 75.8 1.0
HB3 A:CYS1123 4.4 75.8 1.0
O A:CYS1120 4.4 74.3 1.0
CA A:CYS1123 4.4 75.8 1.0
HZ3 A:LYS1116 4.5 66.6 1.0
HD1 A:HIS1296 4.6 66.4 1.0
HB2 A:HIS1114 4.6 65.8 1.0
CA A:HIS1294 4.8 65.2 1.0
HD3 A:LYS1116 4.8 66.6 1.0
HE2 A:HIS1294 4.9 65.2 1.0
HZ2 A:LYS1116 4.9 66.6 1.0
CA A:CYS1120 4.9 74.3 1.0
HD2 A:LYS1116 5.0 66.6 1.0
HD2 A:HIS1294 5.0 65.2 1.0

Reference:

S.Jenni, L.M.Bloyet, R.Diaz-Avalos, B.Liang, S.P.J.Whelan, N.Grigorieff, S.C.Harrison. Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor. Cell Rep V. 30 53 2020.
ISSN: ESSN 2211-1247
PubMed: 31914397
DOI: 10.1016/J.CELREP.2019.12.024
Page generated: Wed Dec 16 12:56:57 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy