Zinc in PDB 5uvm: Hit Family Hydrolase From Clostridium Thermocellum Cth-393

The structure of Hit Family Hydrolase From Clostridium Thermocellum Cth-393, PDB code: 5uvm was solved by J.Habel, W.Tempel, Z.-J.Liu, J.Rose, B.-C.Wang, Southeast Collaboratoryfor Structural Genomics (Secsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.30
Space group	P 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	78.804, 78.804, 114.885, 90.00, 90.00, 90.00
R / Rfree (%)	20.6 / 23.3

The binding sites of Zinc atom in the Hit Family Hydrolase From Clostridium Thermocellum Cth-393 (pdb code 5uvm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Hit Family Hydrolase From Clostridium Thermocellum Cth-393, PDB code: 5uvm:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Hit Family Hydrolase From Clostridium Thermocellum Cth-393


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Hit Family Hydrolase From Clostridium Thermocellum Cth-393 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:34.0 occ:1.00 ND1 A:HIS46 2.0 31.9 1.0 ND1 A:HIS98 2.1 35.8 1.0 SG A:CYS4 2.2 32.0 1.0 SG A:CYS7 2.3 35.5 1.0 CE1 A:HIS46 2.9 31.7 1.0 CE1 A:HIS98 3.1 35.6 1.0 CG A:HIS98 3.1 32.5 1.0 CG A:HIS46 3.1 30.6 1.0 CB A:CYS4 3.1 37.8 1.0 CB A:CYS7 3.3 34.8 1.0 CB A:HIS98 3.4 29.3 1.0 CB A:HIS46 3.6 34.2 1.0 N A:CYS7 3.6 33.6 1.0 CA A:CYS7 4.0 35.1 1.0 NE2 A:HIS46 4.1 28.9 1.0 CD2 A:HIS46 4.2 31.2 1.0 NE2 A:HIS98 4.2 37.6 1.0 CD2 A:HIS98 4.2 37.4 1.0 CA A:HIS46 4.3 38.4 1.0 CA A:CYS4 4.5 39.0 1.0 CB A:PHE6 4.6 31.4 1.0 C A:PHE6 4.7 31.9 1.0 CA A:HIS98 4.7 30.0 1.0 N A:LEU1 4.7 63.6 1.0 O A:CYS4 4.8 35.5 1.0 CB A:LEU1 4.8 66.2 1.0 C A:CYS4 4.9 34.4 1.0 N A:PHE6 5.0 35.5 1.0

Zinc binding site 2 out of 2 in the Hit Family Hydrolase From Clostridium Thermocellum Cth-393


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Hit Family Hydrolase From Clostridium Thermocellum Cth-393 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn201 b:43.9 occ:1.00 ND1 B:HIS98 2.0 40.5 1.0 ND1 B:HIS46 2.2 47.1 1.0 SG B:CYS4 2.2 40.7 1.0 SG B:CYS7 2.3 46.0 1.0 CG B:HIS98 3.0 37.1 1.0 CE1 B:HIS98 3.0 42.9 1.0 CE1 B:HIS46 3.1 49.9 1.0 CG B:HIS46 3.2 45.4 1.0 CB B:CYS4 3.3 43.7 1.0 CB B:HIS98 3.3 36.8 1.0 CB B:CYS7 3.5 40.9 1.0 CB B:HIS46 3.6 44.9 1.0 N B:CYS7 3.7 36.3 1.0 CA B:CYS7 4.1 39.4 1.0 NE2 B:HIS98 4.1 38.5 1.0 CD2 B:HIS98 4.1 41.5 1.0 NE2 B:HIS46 4.2 49.1 1.0 CA B:HIS46 4.3 45.7 1.0 CD2 B:HIS46 4.3 47.9 1.0 CA B:HIS98 4.6 38.2 1.0 CB B:PHE6 4.6 39.0 1.0 CA B:CYS4 4.6 46.2 1.0 C B:PHE6 4.7 36.4 1.0 C B:CYS4 4.9 43.9 1.0 N B:PHE6 4.9 35.3 1.0 O B:CYS4 5.0 44.9 1.0 N B:LEU1 5.0 73.6 1.0 CA B:PHE6 5.0 39.6 1.0

J.Habel, W.Tempel, Z.-J.Liu, J.Rose, B.-C.Wang. Hit Family Hydrolase From Clostridium Thermocellum Cth-393 To Be Published.