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Zinc in PDB 5u6h: Solution Structure of the Zinc Fingers 1 and 2 of MBNL1

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Zinc Fingers 1 and 2 of MBNL1 (pdb code 5u6h). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Zinc Fingers 1 and 2 of MBNL1, PDB code: 5u6h:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 5u6h

Go back to Zinc Binding Sites List in 5u6h
Zinc binding site 1 out of 2 in the Solution Structure of the Zinc Fingers 1 and 2 of MBNL1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Zinc Fingers 1 and 2 of MBNL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:0.0
occ:1.00
NE2 A:HIS38 2.1 0.0 1.0
SG A:CYS27 2.3 0.0 1.0
SG A:CYS34 2.3 0.0 1.0
SG A:CYS19 2.3 0.0 1.0
HE1 A:HIS38 2.6 0.0 1.0
CE1 A:HIS38 2.7 0.0 1.0
HB2 A:CYS19 2.9 0.0 1.0
CB A:CYS19 2.9 0.0 1.0
HB3 A:CYS19 3.1 0.0 1.0
CD2 A:HIS38 3.4 0.0 1.0
CB A:CYS34 3.4 0.0 1.0
HB2 A:PHE22 3.4 0.0 1.0
HB2 A:CYS34 3.5 0.0 1.0
HB3 A:CYS34 3.6 0.0 1.0
HB2 A:CYS27 3.6 0.0 1.0
CB A:CYS27 3.6 0.0 1.0
HD2 A:HIS38 3.9 0.0 1.0
ND1 A:HIS38 4.0 0.0 1.0
HB3 A:CYS27 4.1 0.0 1.0
H A:PHE22 4.2 0.0 1.0
HB2 A:ARG29 4.3 0.0 1.0
CG A:HIS38 4.3 0.0 1.0
HB2 A:GLU21 4.4 0.0 1.0
CA A:CYS19 4.4 0.0 1.0
CB A:PHE22 4.4 0.0 1.0
HB2 A:PHE36 4.5 0.0 1.0
H A:PHE36 4.5 0.0 1.0
H A:ARG29 4.5 0.0 1.0
H A:SER28 4.5 0.0 1.0
HB3 A:PHE22 4.6 0.0 1.0
H A:LYS35 4.6 0.0 1.0
O A:ARG29 4.6 0.0 1.0
HA A:CYS19 4.7 0.0 1.0
CA A:CYS34 4.8 0.0 1.0
HD1 A:HIS38 4.8 0.0 1.0
HA A:CYS27 4.8 0.0 1.0
HD1 A:PHE22 4.9 0.0 1.0
CA A:CYS27 4.9 0.0 1.0
N A:PHE22 4.9 0.0 1.0
HA A:CYS34 4.9 0.0 1.0
HD1 A:PHE36 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 5u6h

Go back to Zinc Binding Sites List in 5u6h
Zinc binding site 2 out of 2 in the Solution Structure of the Zinc Fingers 1 and 2 of MBNL1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Zinc Fingers 1 and 2 of MBNL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn102

b:0.0
occ:1.00
NE2 A:HIS70 2.1 0.0 1.0
HH22 A:ARG63 2.2 0.0 1.0
SG A:CYS66 2.3 0.0 1.0
SG A:CYS61 2.3 0.0 1.0
SG A:CYS53 2.3 0.0 1.0
CD2 A:HIS70 3.0 0.0 1.0
HD2 A:HIS70 3.1 0.0 1.0
NH2 A:ARG63 3.2 0.0 1.0
CE1 A:HIS70 3.2 0.0 1.0
HE A:ARG63 3.3 0.0 1.0
HB2 A:SER56 3.3 0.0 1.0
HB2 A:CYS61 3.4 0.0 1.0
HB2 A:CYS53 3.4 0.0 1.0
CB A:CYS61 3.4 0.0 1.0
CB A:CYS53 3.4 0.0 1.0
CB A:CYS66 3.5 0.0 1.0
HE1 A:HIS70 3.5 0.0 1.0
HB2 A:CYS66 3.5 0.0 1.0
HH21 A:ARG63 3.7 0.0 1.0
HB3 A:CYS61 3.7 0.0 1.0
HB3 A:CYS53 3.7 0.0 1.0
HB3 A:CYS66 3.8 0.0 1.0
HB2 A:ASP55 3.9 0.0 1.0
H A:SER56 3.9 0.0 1.0
CZ A:ARG63 4.0 0.0 1.0
NE A:ARG63 4.0 0.0 1.0
HB2 A:TYR68 4.1 0.0 1.0
CG A:HIS70 4.2 0.0 1.0
HB2 A:ARG63 4.2 0.0 1.0
ND1 A:HIS70 4.3 0.0 1.0
CB A:SER56 4.3 0.0 1.0
HB3 A:SER56 4.5 0.0 1.0
N A:SER56 4.6 0.0 1.0
O A:TYR68 4.7 0.0 1.0
CA A:CYS61 4.8 0.0 1.0
CA A:CYS53 4.8 0.0 1.0
HD2 A:TYR68 4.8 0.0 1.0
H A:TYR68 4.8 0.0 1.0
HA A:CYS61 4.8 0.0 1.0
HA A:CYS53 4.8 0.0 1.0
CA A:CYS66 4.8 0.0 1.0
H A:ARG63 4.8 0.0 1.0
HA A:CYS66 4.9 0.0 1.0
CA A:SER56 5.0 0.0 1.0
CB A:ASP55 5.0 0.0 1.0

Reference:

S.Park, P.D.Phukan, M.Zeeb, M.A.Martinez-Yamout, H.J.Dyson, P.E.Wright. Structural Basis For Interaction of the Tandem Zinc Finger Domains of Human Muscleblind with Cognate Rna From Human Cardiac Troponin T. Biochemistry V. 56 4154 2017.
ISSN: ISSN 1520-4995
PubMed: 28718627
DOI: 10.1021/ACS.BIOCHEM.7B00484
Page generated: Wed Dec 16 10:59:42 2020

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