Zinc in PDB 5svy: MORC3 Cw in Complex with Histone H3K4ME1

The structure of MORC3 Cw in Complex with Histone H3K4ME1, PDB code: 5svy was solved by Q.Tong, F.H.Andrews, T.G.Kutateladze, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.33 / 1.05
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	30.990, 70.660, 26.470, 90.00, 90.00, 90.00
R / Rfree (%)	12.3 / 14.7

The binding sites of Zinc atom in the MORC3 Cw in Complex with Histone H3K4ME1 (pdb code 5svy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the MORC3 Cw in Complex with Histone H3K4ME1, PDB code: 5svy:

Zinc binding site 1 out of 1 in the MORC3 Cw in Complex with Histone H3K4ME1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of MORC3 Cw in Complex with Histone H3K4ME1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn502 b:4.3 occ:0.87 SG A:CYS446 2.3 4.7 0.9 SG A:CYS416 2.3 4.6 0.9 SG A:CYS435 2.3 4.4 1.0 SG A:CYS413 2.4 4.5 0.9 HA A:CYS446 2.9 2.7 0.7 HB3 A:CYS413 3.0 5.8 1.0 HB3 A:CYS416 3.0 9.6 1.0 CB A:CYS413 3.1 4.0 0.8 HB2 A:CYS413 3.1 0.0 0.5 H A:CYS435 3.1 52.6 1.0 HB2 A:CYS435 3.2 0.3 0.7 H A:CYS416 3.2 3.2 0.7 CB A:CYS446 3.2 4.8 0.9 CB A:CYS416 3.3 5.2 0.9 HB3 A:CYS446 3.3 2.7 0.7 CB A:CYS435 3.4 4.4 0.9 CA A:CYS446 3.5 5.3 1.0 N A:CYS416 3.8 6.4 1.0 N A:CYS435 3.9 4.8 1.0 HB3 A:ALA415 3.9 9.3 1.0 HB2 A:CYS416 4.0 0.8 0.5 CA A:CYS416 4.1 6.1 1.0 HB3 A:CYS435 4.1 1.8 0.6 HB2 A:CYS446 4.1 3.0 0.8 HH21 A:ARG420 4.2 2.2 0.6 CA A:CYS435 4.2 4.9 1.0 N A:CYS446 4.3 5.0 0.9 HB2 A:LYS418 4.3 3.5 0.8 H A:CYS446 4.4 3.0 0.7 H A:LYS418 4.4 4.4 1.0 HE A:ARG420 4.5 8.6 1.0 CA A:CYS413 4.5 4.3 0.9 H A:ALA415 4.6 6.8 1.0 HA A:TYR434 4.6 3.9 1.0 HA A:CYS435 4.6 13.6 1.0 HD2 A:LYS418 4.7 7.9 0.6 H A:LEU417 4.7 1.8 0.7 C A:CYS446 4.7 5.7 1.0 O A:CYS446 4.8 6.5 0.9 CB A:ALA415 4.8 7.5 0.9 C A:CYS416 4.8 5.8 1.0 HA A:CYS413 4.9 3.6 0.9 HA A:CYS416 4.9 2.4 0.7 C A:ALA415 4.9 6.4 0.9 NH2 A:ARG420 4.9 4.7 0.9 HZ1 A:LYS418 4.9 8.1 0.8 HB3 A:TYR434 4.9 12.0 1.0 N A:LEU417 5.0 5.9 1.0

F.H.Andrews, Q.Tong, K.D.Sullivan, E.M.Cornett, Y.Zhang, M.Ali, J.Ahn, A.Pandey, A.H.Guo, B.D.Strahl, J.C.Costello, J.M.Espinosa, S.B.Rothbart, T.G.Kutateladze. Multivalent Chromatin Engagement and Inter-Domain Crosstalk Regulate MORC3 Atpase. Cell Rep V. 16 3195 2016.
ISSN: ESSN 2211-1247
PubMed: 27653685
DOI: 10.1016/J.CELREP.2016.08.050