Zinc in PDB 5sbg: The Crystal Structure of Metp in Complex with Zn at A Resolution of 1.34 A.

The structure of The Crystal Structure of Metp in Complex with Zn at A Resolution of 1.34 A., PDB code: 5sbg was solved by L.Di Costanzo, S.La Gatta, M.Chino, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.25 / 1.34
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	37.663, 55.978, 19.128, 90, 90, 90
R / Rfree (%)	13.1 / 17.4

The binding sites of Zinc atom in the The Crystal Structure of Metp in Complex with Zn at A Resolution of 1.34 A. (pdb code 5sbg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of Metp in Complex with Zn at A Resolution of 1.34 A., PDB code: 5sbg:

Zinc binding site 1 out of 1 in the The Crystal Structure of Metp in Complex with Zn at A Resolution of 1.34 A.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Metp in Complex with Zn at A Resolution of 1.34 A. within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn101 b:12.9 occ:1.00 SG C:CYS20 2.3 11.5 1.0 SG C:CYS5 2.3 12.2 1.0 SG C:CYS2 2.3 11.4 1.0 SG C:CYS17 2.4 10.8 1.0 HB3 C:CYS2 3.1 14.3 1.0 HB3 C:CYS20 3.1 14.0 1.0 H C:CYS20 3.1 14.2 1.0 HB3 C:CYS17 3.1 12.9 1.0 CB C:CYS2 3.2 11.9 1.0 HB3 C:CYS5 3.2 14.7 1.0 CB C:CYS17 3.2 10.8 1.0 HB2 C:CYS2 3.3 14.3 1.0 CB C:CYS20 3.3 11.6 1.0 HB2 C:CYS17 3.3 12.9 1.0 H C:CYS5 3.3 15.7 1.0 CB C:CYS5 3.3 12.3 1.0 HB3 C:ASN19 3.7 14.5 1.0 N C:CYS20 3.8 11.8 1.0 N C:CYS5 3.8 13.1 1.0 HB2 C:ASP4 3.8 16.6 1.0 HB3 C:ALA22 3.8 13.3 1.0 HB3 C:ALA7 3.9 17.4 1.0 H C:ALA22 4.0 12.7 1.0 HB2 C:CYS20 4.1 14.0 1.0 CA C:CYS20 4.1 11.1 1.0 HB2 C:ALA22 4.1 13.3 1.0 HD22 C:ASN19 4.1 17.0 1.0 CA C:CYS5 4.1 12.4 1.0 H C:ALA7 4.1 15.0 1.0 HB2 C:CYS5 4.1 14.7 1.0 HB2 C:ALA7 4.3 17.4 1.0 CB C:ALA22 4.4 11.1 1.0 HB3 C:ASP4 4.4 16.6 1.0 H C:ASP4 4.5 15.6 1.0 H C:ASN19 4.5 13.1 1.0 CB C:ASP4 4.5 13.8 1.0 CB C:ALA7 4.5 14.5 1.0 H C:GLY6 4.6 14.4 1.0 CA C:CYS2 4.6 11.4 1.0 CA C:CYS17 4.7 10.8 1.0 C C:ASP4 4.7 12.6 1.0 CB C:ASN19 4.7 12.1 1.0 H C:GLY21 4.7 12.8 1.0 C C:CYS20 4.8 10.8 1.0 C C:CYS5 4.8 12.3 1.0 C C:ASN19 4.8 12.6 1.0 N C:ALA22 4.9 10.6 1.0 ND2 C:ASN19 4.9 14.2 1.0 HA C:CYS20 4.9 13.3 1.0 N C:GLY6 4.9 12.0 1.0 HA C:CYS5 4.9 14.9 1.0 N C:ALA7 4.9 12.5 1.0 N C:GLY21 4.9 10.6 1.0 CA C:ASP4 5.0 12.9 1.0 HA C:CYS2 5.0 13.7 1.0 N C:ASP4 5.0 13.0 1.0

M.Chino, L.Di Costanzo. Miniaturization Process Reloaded - Structural and Functional Insights From A Miniaturized Rubredoxin To Be Published.