Zinc in PDB 5jpx: Solution Structure of the TRIM21 B-BOX2 (B2)

The binding sites of Zinc atom in the Solution Structure of the TRIM21 B-BOX2 (B2) (pdb code 5jpx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the TRIM21 B-BOX2 (B2), PDB code: 5jpx:

Zinc binding site 1 out of 1 in the Solution Structure of the TRIM21 B-BOX2 (B2)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the TRIM21 B-BOX2 (B2) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 NE2 A:HIS95 2.1 0.0 1.0 SG A:CYS111 2.3 0.0 1.0 SG A:CYS114 2.3 0.0 1.0 SG A:CYS92 2.4 0.0 1.0 CD2 A:HIS95 3.0 0.0 1.0 CE1 A:HIS95 3.0 0.0 1.0 HD2 A:HIS95 3.2 0.0 1.0 H A:CYS111 3.3 0.0 1.0 HE1 A:HIS95 3.3 0.0 1.0 HB3 A:CYS111 3.4 0.0 1.0 H A:CYS114 3.4 0.0 1.0 HB2 A:CYS114 3.5 0.0 1.0 HB A:VAL113 3.5 0.0 1.0 HB3 A:CYS92 3.5 0.0 1.0 CB A:CYS111 3.5 0.0 1.0 CB A:CYS114 3.5 0.0 1.0 CB A:CYS92 3.6 0.0 1.0 HB2 A:CYS92 3.8 0.0 1.0 N A:CYS114 3.9 0.0 1.0 N A:CYS111 4.0 0.0 1.0 CG A:HIS95 4.1 0.0 1.0 ND1 A:HIS95 4.1 0.0 1.0 CA A:CYS114 4.3 0.0 1.0 CA A:CYS111 4.3 0.0 1.0 HB2 A:CYS111 4.3 0.0 1.0 HB3 A:CYS114 4.4 0.0 1.0 HA A:CYS114 4.5 0.0 1.0 CB A:VAL113 4.5 0.0 1.0 HB3 A:LEU110 4.6 0.0 1.0 HB A:VAL94 4.7 0.0 1.0 C A:VAL113 4.7 0.0 1.0 OE2 A:GLU97 4.8 0.0 1.0 HA A:LEU110 4.8 0.0 1.0 H A:VAL113 4.9 0.0 1.0 HG12 A:VAL113 4.9 0.0 1.0 C A:CYS111 4.9 0.0 1.0 CA A:CYS92 4.9 0.0 1.0 HD23 A:LEU110 5.0 0.0 1.0 O A:CYS111 5.0 0.0 1.0

A.Wallenhammar, M.Anandapadamanaban, A.Lemak, C.Mirabello, P.Lundstrom, B.Wallner, M.Sunnerhagen. Solution uc(Nmr) Structure of the TRIM21 B-BOX2 and Identification of Residues Involved in Its Interaction with the Ring Domain. Plos One V. 12 81551 2017.
ISSN: ESSN 1932-6203
PubMed: 28753623
DOI: 10.1371/JOURNAL.PONE.0181551