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Zinc in PDB 4uvq: Patg Domain of Unknown Function

Protein crystallography data

The structure of Patg Domain of Unknown Function, PDB code: 4uvq was solved by G.Mann, J.Koehnke, A.F.Bent, R.Graham, U.Schwarz-Linek, J.H.Naismith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.175 / 1.72
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 64.110, 95.190, 40.160, 90.00, 90.00, 90.00
R / Rfree (%) 17.51 / 19.95

Zinc Binding Sites:

The binding sites of Zinc atom in the Patg Domain of Unknown Function (pdb code 4uvq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Patg Domain of Unknown Function, PDB code: 4uvq:

Zinc binding site 1 out of 1 in 4uvq

Go back to Zinc Binding Sites List in 4uvq
Zinc binding site 1 out of 1 in the Patg Domain of Unknown Function


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Patg Domain of Unknown Function within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn3185

b:12.9
occ:1.00
NE2 A:HIS1090 2.0 14.3 1.0
OE2 A:GLU977 2.0 20.8 1.0
ND1 A:HIS1087 2.0 12.6 1.0
OE1 A:GLU977 2.3 21.3 1.0
CD A:GLU977 2.5 19.9 1.0
CE1 A:HIS1087 2.9 16.3 1.0
CE1 A:HIS1090 3.0 17.4 1.0
CD2 A:HIS1090 3.0 14.4 1.0
HE1 A:HIS1087 3.1 19.6 1.0
HA A:HIS1087 3.1 14.6 1.0
CG A:HIS1087 3.1 18.9 1.0
HE1 A:HIS1090 3.2 20.9 1.0
HD2 A:HIS1090 3.2 17.3 1.0
HB3 A:HIS1087 3.3 17.1 1.0
CB A:HIS1087 3.5 14.2 1.0
CA A:HIS1087 3.8 12.2 1.0
CG A:GLU977 4.0 18.1 1.0
NE2 A:HIS1087 4.1 15.2 1.0
ND1 A:HIS1090 4.1 20.3 1.0
CG A:HIS1090 4.2 15.3 1.0
CD2 A:HIS1087 4.2 12.7 1.0
HG3 A:GLU977 4.3 21.7 1.0
O A:HOH2092 4.3 19.1 1.0
HG2 A:GLU977 4.4 21.7 1.0
HB2 A:HIS1087 4.5 17.1 1.0
O A:HIS1087 4.5 13.3 1.0
HE2 A:TYR1086 4.6 18.7 1.0
C A:HIS1087 4.7 11.4 1.0
O A:HOH2091 4.7 22.1 1.0
HD2 A:TYR1086 4.8 13.5 1.0
N A:HIS1087 4.8 10.8 1.0
HE2 A:HIS1087 4.8 18.2 1.0
CE2 A:TYR1086 4.9 15.6 1.0
HD1 A:HIS1090 4.9 24.4 1.0
O A:HOH2090 4.9 27.9 1.0

Reference:

G.Mann, J.Koehnke, A.F.Bent, R.Graham, U.Schwarz-Linek, J.H.Naismith. The Structure of the Cyanobactin Domain of Unknown Function From Patg in the Patellamide Gene Cluster To Be Published.
Page generated: Sun Oct 27 09:19:12 2024

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