Zinc in PDB 4ucj: X-Ray Structure and Activities of An Essential Mononegavirales L- Protein Domain

The structure of X-Ray Structure and Activities of An Essential Mononegavirales L- Protein Domain, PDB code: 4ucj was solved by G.C.Paesen, A.Collet, C.Sallamand, F.Debart, J.J.Vasseur, B.Canard, E.Decroly, J.M.Grimes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.26 / 3.26
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	82.100, 84.530, 181.220, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 22

The binding sites of Zinc atom in the X-Ray Structure and Activities of An Essential Mononegavirales L- Protein Domain (pdb code 4ucj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the X-Ray Structure and Activities of An Essential Mononegavirales L- Protein Domain, PDB code: 4ucj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the X-Ray Structure and Activities of An Essential Mononegavirales L- Protein Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of X-Ray Structure and Activities of An Essential Mononegavirales L- Protein Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2408 b:97.3 occ:1.00 NE2 A:HIS1766 2.1 97.3 1.0 SG A:CYS1802 2.2 0.1 1.0 NE2 A:HIS1798 2.2 97.2 1.0 SG A:CYS1805 2.3 0.4 1.0 CD2 A:HIS1766 2.7 98.1 1.0 CB A:CYS1802 3.0 0.7 1.0 CE1 A:HIS1798 3.0 97.3 1.0 CD2 A:HIS1798 3.2 96.6 1.0 CE1 A:HIS1766 3.2 97.5 1.0 CB A:CYS1805 3.5 0.2 1.0 CD1 A:LEU1773 3.9 0.1 1.0 CG A:HIS1766 4.0 97.5 1.0 N A:CYS1805 4.0 0.0 1.0 ND1 A:HIS1798 4.1 97.6 1.0 ND1 A:HIS1766 4.2 99.0 1.0 CG A:HIS1798 4.2 94.9 1.0 CA A:CYS1805 4.4 0.3 1.0 CA A:CYS1802 4.4 0.7 1.0 CB A:ILE1804 4.5 0.5 1.0 C A:CYS1802 5.0 0.4 1.0 C A:ILE1804 5.0 0.8 1.0

Zinc binding site 2 out of 2 in the X-Ray Structure and Activities of An Essential Mononegavirales L- Protein Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of X-Ray Structure and Activities of An Essential Mononegavirales L- Protein Domain within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn2408 b:0.9 occ:1.00 NE2 B:HIS1766 2.0 0.8 1.0 NE2 B:HIS1798 2.2 93.2 1.0 SG B:CYS1805 2.2 0.3 1.0 SG B:CYS1802 2.2 0.6 1.0 CD2 B:HIS1766 2.7 0.6 1.0 CB B:CYS1802 3.0 0.3 1.0 CE1 B:HIS1798 3.1 93.6 1.0 CD2 B:HIS1798 3.2 92.7 1.0 CE1 B:HIS1766 3.2 0.7 1.0 CB B:CYS1805 3.5 97.8 1.0 CD1 B:LEU1773 3.8 94.9 1.0 CG B:HIS1766 4.0 0.4 1.0 N B:CYS1805 4.0 0.4 1.0 ND1 B:HIS1798 4.2 94.2 1.0 ND1 B:HIS1766 4.2 0.9 1.0 CG B:HIS1798 4.2 91.6 1.0 CA B:CYS1805 4.3 99.4 1.0 CA B:CYS1802 4.5 0.1 1.0 CB B:ILE1804 4.5 0.5 1.0 CG2 B:ILE1765 4.8 0.4 1.0 CG B:LEU1773 5.0 94.1 1.0 C B:ILE1804 5.0 0.2 1.0

G.C.Paesen, A.Collet, C.Sallamand, F.Debart, J.J.Vasseur, B.Canard, E.Decroly, J.M.Grimes. X-Ray Structure and Activities of An Essential Mononegavirales L-Protein Domain. Nat.Commun. V. 6 8749 2015.
ISSN: ESSN 2041-1723
PubMed: 26549102
DOI: 10.1038/NCOMMS9749