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Zinc in PDB 4tmu: Crystal Structure of Recq Catalytic Core From C. Sakazakii Bound to Dna

Protein crystallography data

The structure of Crystal Structure of Recq Catalytic Core From C. Sakazakii Bound to Dna, PDB code: 4tmu was solved by K.A.Manthei, J.L.Keck, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.40
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.348, 93.959, 100.160, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 23.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Recq Catalytic Core From C. Sakazakii Bound to Dna (pdb code 4tmu). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Recq Catalytic Core From C. Sakazakii Bound to Dna, PDB code: 4tmu:

Zinc binding site 1 out of 1 in 4tmu

Go back to Zinc Binding Sites List in 4tmu
Zinc binding site 1 out of 1 in the Crystal Structure of Recq Catalytic Core From C. Sakazakii Bound to Dna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Recq Catalytic Core From C. Sakazakii Bound to Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn601

b:21.4
occ:1.00
SG A:CYS380 2.3 21.8 1.0
SG A:CYS397 2.3 21.7 1.0
SG A:CYS400 2.3 19.4 1.0
SG A:CYS403 2.4 24.8 1.0
CB A:CYS400 3.2 20.8 1.0
CB A:CYS380 3.2 21.0 1.0
CB A:CYS403 3.5 27.7 1.0
N A:CYS397 3.5 27.9 1.0
CB A:CYS397 3.5 24.9 1.0
CA A:CYS380 3.7 22.4 1.0
N A:GLY398 3.9 28.6 1.0
CA A:CYS397 3.9 27.2 1.0
N A:CYS400 4.0 22.6 1.0
N A:ARG381 4.0 21.4 1.0
CA A:CYS400 4.1 21.6 1.0
C A:CYS380 4.2 22.5 1.0
N A:CYS403 4.3 27.2 1.0
N A:ASN399 4.3 27.6 1.0
C A:CYS397 4.3 28.0 1.0
CA A:CYS403 4.5 28.7 1.0
C A:ASN399 4.6 24.8 1.0
C A:PRO396 4.6 26.9 1.0
N A:ARG382 4.6 20.7 1.0
CB A:ARG382 4.7 22.1 1.0
C A:CYS400 4.7 23.1 1.0
O A:CYS400 4.9 23.4 1.0
CA A:GLY398 4.9 28.3 1.0
CA A:PRO396 4.9 27.9 1.0
CB A:PRO396 5.0 28.4 1.0

Reference:

K.A.Manthei, J.L.Keck. Crystal Structure of Recq Catalytic Core From C. Sakazakii Bound to Dna To Be Published.
Page generated: Sun Oct 27 08:23:06 2024

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